Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE3O75131 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CPNE3O75131 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.33■□□□□ 0.2
CPNE3O75131 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE3O75131 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE3O75131 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CPNE3O75131 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CPNE3O75131 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE3O75131 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.32■□□□□ 0.2
CPNE3O75131 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE3O75131 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE3O75131 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CPNE3O75131 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE3O75131 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE3O75131 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE3O75131 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CPNE3O75131 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.32■□□□□ 0.2
CPNE3O75131 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE3O75131 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE3O75131 AL513190.1-201ENST00000621254 727 ntBASIC16.32■□□□□ 0.2
CPNE3O75131 C20orf181-201ENST00000623918 480 ntBASIC16.32■□□□□ 0.2
CPNE3O75131 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE3O75131 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CPNE3O75131 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE3O75131 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE3O75131 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE3O75131 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE3O75131 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CPNE3O75131 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CPNE3O75131 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CPNE3O75131 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE3O75131 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CPNE3O75131 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CPNE3O75131 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.31■□□□□ 0.2
CPNE3O75131 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE3O75131 BCAR1-209ENST00000546196 1340 ntBASIC16.31■□□□□ 0.2
CPNE3O75131 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CPNE3O75131 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CPNE3O75131 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE3O75131 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.31■□□□□ 0.2
CPNE3O75131 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CPNE3O75131 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE3O75131 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.31■□□□□ 0.2
CPNE3O75131 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE3O75131 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE3O75131 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.31■□□□□ 0.2
CPNE3O75131 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.31■□□□□ 0.2
CPNE3O75131 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE3O75131 PDPK2P-202ENST00000562415 1191 ntBASIC16.31■□□□□ 0.2
CPNE3O75131 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CPNE3O75131 OR7E47P-204ENST00000575924 449 ntBASIC16.31■□□□□ 0.2
CPNE3O75131 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 AC007064.4-201ENST00000637740 555 ntBASIC16.31■□□□□ 0.2
CPNE3O75131 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE3O75131 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CPNE3O75131 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 LINC00304-203ENST00000565008 1864 ntBASIC16.31■□□□□ 0.2
CPNE3O75131 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE3O75131 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CPNE3O75131 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE3O75131 AL162727.3-201ENST00000635661 2787 ntBASIC16.3■□□□□ 0.2
CPNE3O75131 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CPNE3O75131 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE3O75131 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms