Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.45■□□□□ 0.38
TSPAN3O60637 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.45■□□□□ 0.38
TSPAN3O60637 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.45■□□□□ 0.38
TSPAN3O60637 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TSPAN3O60637 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TSPAN3O60637 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.44■□□□□ 0.38
TSPAN3O60637 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TSPAN3O60637 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.44■□□□□ 0.38
TSPAN3O60637 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.44■□□□□ 0.38
TSPAN3O60637 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.44■□□□□ 0.38
TSPAN3O60637 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
TSPAN3O60637 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.44■□□□□ 0.38
TSPAN3O60637 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.44■□□□□ 0.38
TSPAN3O60637 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.44■□□□□ 0.38
TSPAN3O60637 AL031432.2-201ENST00000566714 459 ntBASIC17.44■□□□□ 0.38
TSPAN3O60637 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
TSPAN3O60637 AL928711.1-201ENST00000570165 459 ntBASIC17.44■□□□□ 0.38
TSPAN3O60637 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.44■□□□□ 0.38
TSPAN3O60637 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.44■□□□□ 0.38
TSPAN3O60637 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.44■□□□□ 0.38
TSPAN3O60637 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.44■□□□□ 0.38
TSPAN3O60637 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TSPAN3O60637 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 AC092068.3-201ENST00000587894 2016 ntBASIC17.43■□□□□ 0.38
TSPAN3O60637 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TSPAN3O60637 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TSPAN3O60637 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TSPAN3O60637 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.43■□□□□ 0.38
TSPAN3O60637 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TSPAN3O60637 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TSPAN3O60637 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TSPAN3O60637 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TSPAN3O60637 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.43■□□□□ 0.38
TSPAN3O60637 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TSPAN3O60637 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.43■□□□□ 0.38
TSPAN3O60637 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.43■□□□□ 0.38
TSPAN3O60637 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.43■□□□□ 0.38
TSPAN3O60637 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.43■□□□□ 0.38
TSPAN3O60637 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.43■□□□□ 0.38
TSPAN3O60637 DNAJB3-202ENST00000449667 1266 ntBASIC17.43■□□□□ 0.38
TSPAN3O60637 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TSPAN3O60637 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.43■□□□□ 0.38
TSPAN3O60637 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.43■□□□□ 0.38
TSPAN3O60637 DUX4L17-201ENST00000557360 1267 ntBASIC17.43■□□□□ 0.38
TSPAN3O60637 AP002472.1-201ENST00000577490 586 ntBASIC17.43■□□□□ 0.38
TSPAN3O60637 MIR4515-201ENST00000584082 81 ntBASIC17.43■□□□□ 0.38
TSPAN3O60637 AC079781.4-201ENST00000641908 219 ntBASIC17.43■□□□□ 0.38
TSPAN3O60637 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TSPAN3O60637 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.43■□□□□ 0.38
TSPAN3O60637 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TSPAN3O60637 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.43■□□□□ 0.38
TSPAN3O60637 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TSPAN3O60637 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TSPAN3O60637 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TSPAN3O60637 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TSPAN3O60637 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TSPAN3O60637 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms