Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PLOD3O60568 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PLOD3O60568 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PLOD3O60568 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PLOD3O60568 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PLOD3O60568 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PLOD3O60568 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PLOD3O60568 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PLOD3O60568 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PLOD3O60568 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.02■□□□□ 0.16
PLOD3O60568 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.02■□□□□ 0.16
PLOD3O60568 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PLOD3O60568 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PLOD3O60568 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.02■□□□□ 0.16
PLOD3O60568 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.02■□□□□ 0.16
PLOD3O60568 AL450487.1-201ENST00000426799 995 ntBASIC16.02■□□□□ 0.16
PLOD3O60568 EMBP1-201ENST00000458200 901 ntBASIC16.02■□□□□ 0.16
PLOD3O60568 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.02■□□□□ 0.16
PLOD3O60568 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.02■□□□□ 0.16
PLOD3O60568 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PLOD3O60568 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.02■□□□□ 0.16
PLOD3O60568 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.02■□□□□ 0.15
PLOD3O60568 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
PLOD3O60568 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.02■□□□□ 0.15
PLOD3O60568 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PLOD3O60568 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PLOD3O60568 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PLOD3O60568 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
PLOD3O60568 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PLOD3O60568 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PLOD3O60568 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PLOD3O60568 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.02■□□□□ 0.15
PLOD3O60568 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.02■□□□□ 0.15
PLOD3O60568 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PLOD3O60568 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.01■□□□□ 0.15
PLOD3O60568 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.01■□□□□ 0.15
PLOD3O60568 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PLOD3O60568 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.01■□□□□ 0.15
PLOD3O60568 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PLOD3O60568 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PLOD3O60568 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.01■□□□□ 0.15
PLOD3O60568 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.01■□□□□ 0.15
PLOD3O60568 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 AL121912.1-201ENST00000603683 238 ntBASIC16.01■□□□□ 0.15
PLOD3O60568 AC004706.3-202ENST00000621574 984 ntBASIC16.01■□□□□ 0.15
PLOD3O60568 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PLOD3O60568 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.01■□□□□ 0.15
PLOD3O60568 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
PLOD3O60568 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.01■□□□□ 0.15
PLOD3O60568 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.01■□□□□ 0.15
PLOD3O60568 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PLOD3O60568 AL391005.1-201ENST00000623953 2435 ntBASIC16■□□□□ 0.15
PLOD3O60568 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PLOD3O60568 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16■□□□□ 0.15
PLOD3O60568 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16■□□□□ 0.15
PLOD3O60568 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 AP002414.1-201ENST00000391405 1147 ntBASIC16■□□□□ 0.15
PLOD3O60568 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16■□□□□ 0.15
PLOD3O60568 LAGE3P1-201ENST00000425356 484 ntBASIC16■□□□□ 0.15
PLOD3O60568 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16■□□□□ 0.15
PLOD3O60568 FAAHP1-202ENST00000446499 1238 ntBASIC16■□□□□ 0.15
PLOD3O60568 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16■□□□□ 0.15
PLOD3O60568 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16■□□□□ 0.15
PLOD3O60568 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16■□□□□ 0.15
PLOD3O60568 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16■□□□□ 0.15
PLOD3O60568 KRT126P-201ENST00000549467 1181 ntBASIC16■□□□□ 0.15
PLOD3O60568 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16■□□□□ 0.15
PLOD3O60568 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16■□□□□ 0.15
PLOD3O60568 AC107918.4-202ENST00000641623 219 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms