Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.2■□□□□ 0.18
LCMT2O60294 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LCMT2O60294 AP000347.1-202ENST00000435868 847 ntBASIC16.2■□□□□ 0.18
LCMT2O60294 FAM185BP-201ENST00000443595 716 ntBASIC16.2■□□□□ 0.18
LCMT2O60294 KRT18P2-201ENST00000447938 1258 ntBASIC16.2■□□□□ 0.18
LCMT2O60294 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.2■□□□□ 0.18
LCMT2O60294 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LCMT2O60294 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.2■□□□□ 0.18
LCMT2O60294 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.2■□□□□ 0.18
LCMT2O60294 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.2■□□□□ 0.18
LCMT2O60294 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.2■□□□□ 0.18
LCMT2O60294 ZNF259P1-201ENST00000407656 1365 ntBASIC16.2■□□□□ 0.18
LCMT2O60294 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.2■□□□□ 0.18
LCMT2O60294 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.2■□□□□ 0.18
LCMT2O60294 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
LCMT2O60294 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 AC078925.2-201ENST00000624013 1973 ntBASIC16.2■□□□□ 0.18
LCMT2O60294 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LCMT2O60294 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LCMT2O60294 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.2■□□□□ 0.18
LCMT2O60294 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LCMT2O60294 AGGF1P2-201ENST00000426656 2106 ntBASIC16.19■□□□□ 0.18
LCMT2O60294 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LCMT2O60294 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.19■□□□□ 0.18
LCMT2O60294 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LCMT2O60294 AC011676.5-201ENST00000624864 2660 ntBASIC16.19■□□□□ 0.18
LCMT2O60294 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.19■□□□□ 0.18
LCMT2O60294 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LCMT2O60294 AL022342.1-201ENST00000400363 863 ntBASIC16.19■□□□□ 0.18
LCMT2O60294 AC007967.2-201ENST00000432613 625 ntBASIC16.19■□□□□ 0.18
LCMT2O60294 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.19■□□□□ 0.18
LCMT2O60294 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.19■□□□□ 0.18
LCMT2O60294 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.19■□□□□ 0.18
LCMT2O60294 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LCMT2O60294 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.19■□□□□ 0.18
LCMT2O60294 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.19■□□□□ 0.18
LCMT2O60294 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
LCMT2O60294 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.19■□□□□ 0.18
LCMT2O60294 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
LCMT2O60294 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LCMT2O60294 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LCMT2O60294 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LCMT2O60294 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.18■□□□□ 0.18
LCMT2O60294 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 FLJ38576-201ENST00000623820 2459 ntBASIC16.18■□□□□ 0.18
LCMT2O60294 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
LCMT2O60294 PMS2P1-201ENST00000431037 1228 ntBASIC16.18■□□□□ 0.18
LCMT2O60294 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.18■□□□□ 0.18
LCMT2O60294 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.18■□□□□ 0.18
LCMT2O60294 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.18■□□□□ 0.18
LCMT2O60294 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.18■□□□□ 0.18
LCMT2O60294 CXCL1P1-201ENST00000502804 216 ntBASIC16.18■□□□□ 0.18
LCMT2O60294 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.18■□□□□ 0.18
LCMT2O60294 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.18■□□□□ 0.18
LCMT2O60294 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LCMT2O60294 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.18■□□□□ 0.18
LCMT2O60294 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.18■□□□□ 0.18
LCMT2O60294 ACTL9-202ENST00000612068 1252 ntBASIC16.18■□□□□ 0.18
LCMT2O60294 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LCMT2O60294 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LCMT2O60294 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms