Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.35■□□□□ 0.53
EXTL3O43909 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EXTL3O43909 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EXTL3O43909 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
EXTL3O43909 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.35■□□□□ 0.53
EXTL3O43909 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
EXTL3O43909 HCG4-201ENST00000418983 998 ntBASIC18.35■□□□□ 0.53
EXTL3O43909 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.35■□□□□ 0.53
EXTL3O43909 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.35■□□□□ 0.53
EXTL3O43909 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
EXTL3O43909 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.35■□□□□ 0.53
EXTL3O43909 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
EXTL3O43909 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.35■□□□□ 0.53
EXTL3O43909 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.35■□□□□ 0.53
EXTL3O43909 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.35■□□□□ 0.53
EXTL3O43909 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
EXTL3O43909 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EXTL3O43909 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
EXTL3O43909 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EXTL3O43909 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EXTL3O43909 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EXTL3O43909 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.35■□□□□ 0.53
EXTL3O43909 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.35■□□□□ 0.53
EXTL3O43909 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
EXTL3O43909 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EXTL3O43909 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EXTL3O43909 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.34■□□□□ 0.53
EXTL3O43909 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
EXTL3O43909 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
EXTL3O43909 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
EXTL3O43909 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
EXTL3O43909 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
EXTL3O43909 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.34■□□□□ 0.53
EXTL3O43909 MIR4515-201ENST00000584082 81 ntBASIC18.34■□□□□ 0.53
EXTL3O43909 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
EXTL3O43909 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.34■□□□□ 0.53
EXTL3O43909 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.34■□□□□ 0.53
EXTL3O43909 AC023141.13-201ENST00000604991 943 ntBASIC18.34■□□□□ 0.53
EXTL3O43909 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 AC007064.4-201ENST00000637740 555 ntBASIC18.34■□□□□ 0.53
EXTL3O43909 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
EXTL3O43909 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
EXTL3O43909 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EXTL3O43909 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EXTL3O43909 AC106886.4-201ENST00000623557 2502 ntBASIC18.33■□□□□ 0.53
EXTL3O43909 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
EXTL3O43909 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
EXTL3O43909 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EXTL3O43909 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
EXTL3O43909 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
EXTL3O43909 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
EXTL3O43909 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.33■□□□□ 0.52
EXTL3O43909 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
EXTL3O43909 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
EXTL3O43909 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EXTL3O43909 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.33■□□□□ 0.52
EXTL3O43909 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.33■□□□□ 0.52
EXTL3O43909 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EXTL3O43909 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.33■□□□□ 0.52
EXTL3O43909 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.33■□□□□ 0.52
EXTL3O43909 AC087641.1-201ENST00000557561 1021 ntBASIC18.33■□□□□ 0.52
EXTL3O43909 AC004877.2-201ENST00000623941 599 ntBASIC18.33■□□□□ 0.52
EXTL3O43909 AL645728.2-201ENST00000641974 660 ntBASIC18.33■□□□□ 0.52
EXTL3O43909 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EXTL3O43909 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EXTL3O43909 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EXTL3O43909 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EXTL3O43909 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
EXTL3O43909 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.33■□□□□ 0.52
EXTL3O43909 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
EXTL3O43909 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EXTL3O43909 AC012569.1-201ENST00000591191 1524 ntBASIC18.33■□□□□ 0.52
EXTL3O43909 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.33■□□□□ 0.52
EXTL3O43909 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EXTL3O43909 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EXTL3O43909 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.33■□□□□ 0.52
EXTL3O43909 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EXTL3O43909 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.32■□□□□ 0.52
EXTL3O43909 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
EXTL3O43909 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EXTL3O43909 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
EXTL3O43909 BCAR1-209ENST00000546196 1340 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms