Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMP2AO43633 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP2AO43633 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CHMP2AO43633 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CHMP2AO43633 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CHMP2AO43633 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMP2AO43633 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
CHMP2AO43633 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.04■□□□□ 0.64
CHMP2AO43633 AC124947.2-201ENST00000547118 1133 ntBASIC19.04■□□□□ 0.64
CHMP2AO43633 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMP2AO43633 PDPK2P-202ENST00000562415 1191 ntBASIC19.04■□□□□ 0.64
CHMP2AO43633 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP2AO43633 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMP2AO43633 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMP2AO43633 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
CHMP2AO43633 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMP2AO43633 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHMP2AO43633 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP2AO43633 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP2AO43633 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP2AO43633 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2AO43633 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2AO43633 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CHMP2AO43633 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2AO43633 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2AO43633 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMP2AO43633 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.03■□□□□ 0.64
CHMP2AO43633 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMP2AO43633 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHMP2AO43633 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.03■□□□□ 0.64
CHMP2AO43633 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMP2AO43633 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.03■□□□□ 0.64
CHMP2AO43633 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.03■□□□□ 0.64
CHMP2AO43633 AL078644.1-201ENST00000609881 752 ntBASIC19.03■□□□□ 0.64
CHMP2AO43633 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.03■□□□□ 0.64
CHMP2AO43633 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2AO43633 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
CHMP2AO43633 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP2AO43633 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2AO43633 TOP3BP1-201ENST00000420768 1380 ntBASIC19.03■□□□□ 0.64
CHMP2AO43633 AL021920.2-201ENST00000624828 1351 ntBASIC19.03■□□□□ 0.64
CHMP2AO43633 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP2AO43633 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2AO43633 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2AO43633 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CHMP2AO43633 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP2AO43633 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2AO43633 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP2AO43633 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CHMP2AO43633 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.03■□□□□ 0.64
CHMP2AO43633 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CHMP2AO43633 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CHMP2AO43633 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 AC080080.1-201ENST00000625121 2420 ntBASIC19.02■□□□□ 0.64
CHMP2AO43633 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CHMP2AO43633 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP2AO43633 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMP2AO43633 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMP2AO43633 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 GPX1P2-201ENST00000429271 606 ntBASIC19.02■□□□□ 0.64
CHMP2AO43633 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP2AO43633 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.02■□□□□ 0.64
CHMP2AO43633 ALG1L5P-201ENST00000482043 771 ntBASIC19.02■□□□□ 0.64
CHMP2AO43633 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.02■□□□□ 0.64
CHMP2AO43633 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP2AO43633 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.02■□□□□ 0.64
CHMP2AO43633 AC092919.2-201ENST00000623631 1645 ntBASIC19.02■□□□□ 0.64
CHMP2AO43633 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CHMP2AO43633 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.02■□□□□ 0.63
CHMP2AO43633 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP2AO43633 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP2AO43633 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP2AO43633 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms