Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.82■□□□□ 0.44
SOX1O00570 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.82■□□□□ 0.44
SOX1O00570 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.82■□□□□ 0.44
SOX1O00570 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.82■□□□□ 0.44
SOX1O00570 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.82■□□□□ 0.44
SOX1O00570 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.82■□□□□ 0.44
SOX1O00570 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.82■□□□□ 0.44
SOX1O00570 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 ACTG1P17-201ENST00000558391 1119 ntBASIC17.82■□□□□ 0.44
SOX1O00570 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.82■□□□□ 0.44
SOX1O00570 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.82■□□□□ 0.44
SOX1O00570 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.82■□□□□ 0.44
SOX1O00570 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SOX1O00570 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SOX1O00570 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SOX1O00570 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.82■□□□□ 0.44
SOX1O00570 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SOX1O00570 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX1O00570 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SOX1O00570 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SOX1O00570 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SOX1O00570 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.81■□□□□ 0.44
SOX1O00570 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX1O00570 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SOX1O00570 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.81■□□□□ 0.44
SOX1O00570 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SOX1O00570 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SOX1O00570 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX1O00570 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX1O00570 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.81■□□□□ 0.44
SOX1O00570 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.81■□□□□ 0.44
SOX1O00570 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX1O00570 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.81■□□□□ 0.44
SOX1O00570 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.81■□□□□ 0.44
SOX1O00570 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.81■□□□□ 0.44
SOX1O00570 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.81■□□□□ 0.44
SOX1O00570 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.81■□□□□ 0.44
SOX1O00570 SPCS2P2-201ENST00000603270 608 ntBASIC17.81■□□□□ 0.44
SOX1O00570 AC091271.1-201ENST00000611877 1162 ntBASIC17.81■□□□□ 0.44
SOX1O00570 AC020765.3-201ENST00000613051 740 ntBASIC17.81■□□□□ 0.44
SOX1O00570 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX1O00570 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX1O00570 AC126763.1-201ENST00000552015 2118 ntBASIC17.81■□□□□ 0.44
SOX1O00570 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
SOX1O00570 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SOX1O00570 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX1O00570 AL020996.1-203ENST00000536896 2307 ntBASIC17.81■□□□□ 0.44
SOX1O00570 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SOX1O00570 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SOX1O00570 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.8■□□□□ 0.44
SOX1O00570 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SOX1O00570 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SOX1O00570 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.8■□□□□ 0.44
SOX1O00570 AC104457.1-201ENST00000401024 814 ntBASIC17.8■□□□□ 0.44
SOX1O00570 NUS1P3-201ENST00000423502 862 ntBASIC17.8■□□□□ 0.44
SOX1O00570 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SOX1O00570 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.8■□□□□ 0.44
SOX1O00570 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.8■□□□□ 0.44
SOX1O00570 RPS2P36-201ENST00000456516 831 ntBASIC17.8■□□□□ 0.44
SOX1O00570 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.8■□□□□ 0.44
SOX1O00570 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.8■□□□□ 0.44
SOX1O00570 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.8■□□□□ 0.44
SOX1O00570 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.8■□□□□ 0.44
SOX1O00570 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SOX1O00570 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.8■□□□□ 0.44
SOX1O00570 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.8■□□□□ 0.44
SOX1O00570 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SOX1O00570 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX1O00570 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX1O00570 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX1O00570 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX1O00570 AL096828.2-201ENST00000567259 1965 ntBASIC17.79■□□□□ 0.44
SOX1O00570 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SOX1O00570 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX1O00570 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SOX1O00570 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.79■□□□□ 0.44
SOX1O00570 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
SOX1O00570 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SOX1O00570 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms