Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC10.77□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AC073347.1-201ENST00000421633 2643 ntBASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ALOX12P2-203ENST00000570921 1945 ntBASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 SLC25A1P3-201ENST00000395415 828 ntBASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 NIFKP9-201ENST00000419265 221 ntBASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AC104390.1-201ENST00000555663 520 ntBASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AC026271.3-201ENST00000571884 352 ntBASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AC130371.2-201ENST00000619443 611 ntBASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 TNRC18P2-201ENST00000417666 2714 ntBASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TMEM256-PLSCR3K7ERE1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms