Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 YBX1P10-201ENST00000444752 975 ntBASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LINC01101-201ENST00000622953 1884 ntBASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AL109954.1-202ENST00000564051 2148 ntBASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 OR2I1P-210ENST00000642037 4691 ntBASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SLC25A1P3-201ENST00000395415 828 ntBASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AL512625.2-201ENST00000417533 625 ntBASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AL355472.2-201ENST00000422958 438 ntBASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 AC006504.5-208ENST00000588784 2401 ntBASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BOLA2-SMG1P6H3BVE0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms