Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 AC027601.4-201ENST00000611259 610 ntBASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 AC004790.2-201ENST00000623588 572 ntBASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 CICP6-201ENST00000457191 2729 ntBASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SMIM9A6NGZ8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 FRMD8P1-201ENST00000440433 1524 ntBASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 AL022342.1-201ENST00000400363 863 ntBASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 RNA5SP416-201ENST00000516838 111 ntBASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 KRT18P58-201ENST00000527480 1120 ntBASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 FAM197Y3-203ENST00000618346 717 ntBASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM9A6NGZ8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SMIM9A6NGZ8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM9A6NGZ8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM9A6NGZ8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM9A6NGZ8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.28□□□□□ -0.44
SMIM9A6NGZ8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.28□□□□□ -0.44
SMIM9A6NGZ8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms