Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 AL391807.1-203ENST00000604392 2365 ntBASIC11.96□□□□□ -0.5
LINC01546A6NGU7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
LINC01546A6NGU7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 IGHGP-201ENST00000390555 1178 ntBASIC11.95□□□□□ -0.5
LINC01546A6NGU7 AP000523.1-201ENST00000398242 1049 ntBASIC11.95□□□□□ -0.5
LINC01546A6NGU7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 STK19B-204ENST00000512515 211 ntBASIC11.95□□□□□ -0.5
LINC01546A6NGU7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC01546A6NGU7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 TSPY14P-201ENST00000303979 915 ntBASIC11.94□□□□□ -0.5
LINC01546A6NGU7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 AP002414.1-201ENST00000391405 1147 ntBASIC11.94□□□□□ -0.5
LINC01546A6NGU7 AC026396.1-201ENST00000419388 421 ntBASIC11.94□□□□□ -0.5
LINC01546A6NGU7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC01546A6NGU7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms