Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD3L3A6NE82 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 TUBB3P1-201ENST00000405796 1332 ntBASIC14.79□□□□□ -0.04
MBD3L3A6NE82 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 MIR3197-201ENST00000582241 73 ntBASIC14.79□□□□□ -0.04
MBD3L3A6NE82 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 AL133373.2-201ENST00000623187 2828 ntBASIC14.79□□□□□ -0.04
MBD3L3A6NE82 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MBD3L3A6NE82 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 AL023806.1-201ENST00000603994 1649 ntBASIC14.78□□□□□ -0.04
MBD3L3A6NE82 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 KLF2P3-201ENST00000451977 1087 ntBASIC14.78□□□□□ -0.04
MBD3L3A6NE82 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 AC105233.2-201ENST00000523697 349 ntBASIC14.78□□□□□ -0.04
MBD3L3A6NE82 AF228730.5-201ENST00000530288 346 ntBASIC14.78□□□□□ -0.04
MBD3L3A6NE82 ALG1L8P-201ENST00000533887 760 ntBASIC14.78□□□□□ -0.04
MBD3L3A6NE82 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 AC005498.2-205ENST00000593218 784 ntBASIC14.78□□□□□ -0.04
MBD3L3A6NE82 AC073389.1-201ENST00000595595 795 ntBASIC14.78□□□□□ -0.04
MBD3L3A6NE82 AL096865.1-201ENST00000606796 927 ntBASIC14.78□□□□□ -0.04
MBD3L3A6NE82 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 PP12613-201ENST00000424958 2230 ntBASIC14.78□□□□□ -0.04
MBD3L3A6NE82 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.78□□□□□ -0.04
MBD3L3A6NE82 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms