Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
MACF1Q9UPN3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC10.28□□□□□ -0.76
MACF1Q9UPN3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC10.28□□□□□ -0.76
MACF1Q9UPN3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC10.28□□□□□ -0.76
MACF1Q9UPN3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
MACF1Q9UPN3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.27□□□□□ -0.76
MACF1Q9UPN3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC10.27□□□□□ -0.76
MACF1Q9UPN3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC10.27□□□□□ -0.77
MACF1Q9UPN3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
MACF1Q9UPN3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
MACF1Q9UPN3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC10.27□□□□□ -0.77
MACF1Q9UPN3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
MACF1Q9UPN3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC10.27□□□□□ -0.77
MACF1Q9UPN3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
MACF1Q9UPN3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC10.27□□□□□ -0.77
MACF1Q9UPN3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC10.27□□□□□ -0.77
MACF1Q9UPN3 AC093827.2-201ENST00000512654 315 ntBASIC10.26□□□□□ -0.77
MACF1Q9UPN3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
MACF1Q9UPN3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
MACF1Q9UPN3 RASA4CP-201ENST00000424092 1398 ntBASIC10.26□□□□□ -0.77
MACF1Q9UPN3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC10.26□□□□□ -0.77
MACF1Q9UPN3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
MACF1Q9UPN3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
MACF1Q9UPN3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC10.26□□□□□ -0.77
MACF1Q9UPN3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
MACF1Q9UPN3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC10.26□□□□□ -0.77
MACF1Q9UPN3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
MACF1Q9UPN3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
MACF1Q9UPN3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
MACF1Q9UPN3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
MACF1Q9UPN3 AC004911.1-201ENST00000416316 871 ntBASIC10.25□□□□□ -0.77
MACF1Q9UPN3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC10.25□□□□□ -0.77
MACF1Q9UPN3 MTDHP2-201ENST00000601468 714 ntBASIC10.25□□□□□ -0.77
MACF1Q9UPN3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
MACF1Q9UPN3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
MACF1Q9UPN3 EDA-201ENST00000338901 1233 ntBASIC10.25□□□□□ -0.77
MACF1Q9UPN3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
MACF1Q9UPN3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC10.25□□□□□ -0.77
MACF1Q9UPN3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
MACF1Q9UPN3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC10.25□□□□□ -0.77
MACF1Q9UPN3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC10.25□□□□□ -0.77
MACF1Q9UPN3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
MACF1Q9UPN3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC10.24□□□□□ -0.77
MACF1Q9UPN3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
MACF1Q9UPN3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC10.24□□□□□ -0.77
MACF1Q9UPN3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC10.24□□□□□ -0.77
MACF1Q9UPN3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC10.24□□□□□ -0.77
MACF1Q9UPN3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
MACF1Q9UPN3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
MACF1Q9UPN3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
MACF1Q9UPN3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
MACF1Q9UPN3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 GXYLT1P5-201ENST00000614548 1189 ntBASIC10.23□□□□□ -0.77
MACF1Q9UPN3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC10.23□□□□□ -0.77
MACF1Q9UPN3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
MACF1Q9UPN3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC10.21□□□□□ -0.77
MACF1Q9UPN3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
MACF1Q9UPN3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
MACF1Q9UPN3 RAP2CP1-201ENST00000605103 478 ntBASIC10.21□□□□□ -0.77
MACF1Q9UPN3 RPS2P7-201ENST00000447334 885 ntBASIC10.21□□□□□ -0.77
MACF1Q9UPN3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
MACF1Q9UPN3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
MACF1Q9UPN3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
MACF1Q9UPN3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
MACF1Q9UPN3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
MACF1Q9UPN3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
MACF1Q9UPN3 CA15P2-201ENST00000611168 834 ntBASIC10.21□□□□□ -0.78
MACF1Q9UPN3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms