Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COPS3Q9UNS2 AL139125.2-201ENST00000623134 1869 ntBASIC21.32■■□□□ 1
COPS3Q9UNS2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COPS3Q9UNS2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
COPS3Q9UNS2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COPS3Q9UNS2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.32■■□□□ 1
COPS3Q9UNS2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.31■■□□□ 1
COPS3Q9UNS2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPS3Q9UNS2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.31■■□□□ 1
COPS3Q9UNS2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
COPS3Q9UNS2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.31■■□□□ 1
COPS3Q9UNS2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COPS3Q9UNS2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
COPS3Q9UNS2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.3■■□□□ 1
COPS3Q9UNS2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
COPS3Q9UNS2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPS3Q9UNS2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.3■■□□□ 1
COPS3Q9UNS2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.3■■□□□ 1
COPS3Q9UNS2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPS3Q9UNS2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPS3Q9UNS2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS3Q9UNS2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS3Q9UNS2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.29■■□□□ 1
COPS3Q9UNS2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS3Q9UNS2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS3Q9UNS2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COPS3Q9UNS2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.29■■□□□ 1
COPS3Q9UNS2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS3Q9UNS2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
COPS3Q9UNS2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.29■■□□□ 1
COPS3Q9UNS2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COPS3Q9UNS2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COPS3Q9UNS2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
COPS3Q9UNS2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.28■■□□□ 1
COPS3Q9UNS2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.27■■□□□ 1
COPS3Q9UNS2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COPS3Q9UNS2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COPS3Q9UNS2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COPS3Q9UNS2 CR559946.2-201ENST00000623684 991 ntBASIC21.27■■□□□ 1
COPS3Q9UNS2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
COPS3Q9UNS2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COPS3Q9UNS2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.26■□□□□ 0.99
COPS3Q9UNS2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPS3Q9UNS2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPS3Q9UNS2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COPS3Q9UNS2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.26■□□□□ 0.99
COPS3Q9UNS2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.26■□□□□ 0.99
COPS3Q9UNS2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COPS3Q9UNS2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COPS3Q9UNS2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.26■□□□□ 0.99
COPS3Q9UNS2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.25■□□□□ 0.99
COPS3Q9UNS2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COPS3Q9UNS2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COPS3Q9UNS2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.25■□□□□ 0.99
COPS3Q9UNS2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.25■□□□□ 0.99
COPS3Q9UNS2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
COPS3Q9UNS2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
COPS3Q9UNS2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPS3Q9UNS2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COPS3Q9UNS2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.24■□□□□ 0.99
COPS3Q9UNS2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.24■□□□□ 0.99
COPS3Q9UNS2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPS3Q9UNS2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPS3Q9UNS2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPS3Q9UNS2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COPS3Q9UNS2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COPS3Q9UNS2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COPS3Q9UNS2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
COPS3Q9UNS2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COPS3Q9UNS2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.21■□□□□ 0.99
COPS3Q9UNS2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.21■□□□□ 0.99
COPS3Q9UNS2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.21■□□□□ 0.99
COPS3Q9UNS2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COPS3Q9UNS2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
COPS3Q9UNS2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
COPS3Q9UNS2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COPS3Q9UNS2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COPS3Q9UNS2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COPS3Q9UNS2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COPS3Q9UNS2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COPS3Q9UNS2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
COPS3Q9UNS2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COPS3Q9UNS2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms