Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 AC145676.1-201ENST00000514988 2004 ntBASIC20.84■□□□□ 0.93
DUX4Q9UBX2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.84■□□□□ 0.93
DUX4Q9UBX2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DUX4Q9UBX2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.83■□□□□ 0.93
DUX4Q9UBX2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
DUX4Q9UBX2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DUX4Q9UBX2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.83■□□□□ 0.92
DUX4Q9UBX2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DUX4Q9UBX2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DUX4Q9UBX2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
DUX4Q9UBX2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DUX4Q9UBX2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DUX4Q9UBX2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DUX4Q9UBX2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DUX4Q9UBX2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DUX4Q9UBX2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DUX4Q9UBX2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.81■□□□□ 0.92
DUX4Q9UBX2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DUX4Q9UBX2 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.81■□□□□ 0.92
DUX4Q9UBX2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DUX4Q9UBX2 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.81■□□□□ 0.92
DUX4Q9UBX2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DUX4Q9UBX2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
DUX4Q9UBX2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
DUX4Q9UBX2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DUX4Q9UBX2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DUX4Q9UBX2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DUX4Q9UBX2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DUX4Q9UBX2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DUX4Q9UBX2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DUX4Q9UBX2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DUX4Q9UBX2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DUX4Q9UBX2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DUX4Q9UBX2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
DUX4Q9UBX2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
DUX4Q9UBX2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.79■□□□□ 0.92
DUX4Q9UBX2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.79■□□□□ 0.92
DUX4Q9UBX2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.79■□□□□ 0.92
DUX4Q9UBX2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.79■□□□□ 0.92
DUX4Q9UBX2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.79■□□□□ 0.92
DUX4Q9UBX2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DUX4Q9UBX2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.77■□□□□ 0.92
DUX4Q9UBX2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
DUX4Q9UBX2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.77■□□□□ 0.91
DUX4Q9UBX2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
DUX4Q9UBX2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.76■□□□□ 0.91
DUX4Q9UBX2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DUX4Q9UBX2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
DUX4Q9UBX2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DUX4Q9UBX2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.76■□□□□ 0.91
DUX4Q9UBX2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.76■□□□□ 0.91
DUX4Q9UBX2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
DUX4Q9UBX2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DUX4Q9UBX2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DUX4Q9UBX2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
DUX4Q9UBX2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DUX4Q9UBX2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DUX4Q9UBX2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DUX4Q9UBX2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DUX4Q9UBX2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
DUX4Q9UBX2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DUX4Q9UBX2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
DUX4Q9UBX2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
DUX4Q9UBX2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DUX4Q9UBX2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
DUX4Q9UBX2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.74■□□□□ 0.91
DUX4Q9UBX2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
DUX4Q9UBX2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DUX4Q9UBX2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DUX4Q9UBX2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.74■□□□□ 0.91
DUX4Q9UBX2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DUX4Q9UBX2 LINC00543-201ENST00000567234 1845 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms