Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH20Q9HBT6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH20Q9HBT6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH20Q9HBT6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH20Q9HBT6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH20Q9HBT6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH20Q9HBT6 AC092803.2-201ENST00000564287 1899 ntBASIC20.92■□□□□ 0.94
CDH20Q9HBT6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH20Q9HBT6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.92■□□□□ 0.94
CDH20Q9HBT6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH20Q9HBT6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.91■□□□□ 0.94
CDH20Q9HBT6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH20Q9HBT6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
CDH20Q9HBT6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH20Q9HBT6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDH20Q9HBT6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH20Q9HBT6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH20Q9HBT6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH20Q9HBT6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH20Q9HBT6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.9■□□□□ 0.94
CDH20Q9HBT6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH20Q9HBT6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH20Q9HBT6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH20Q9HBT6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CDH20Q9HBT6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH20Q9HBT6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDH20Q9HBT6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH20Q9HBT6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDH20Q9HBT6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH20Q9HBT6 KRT18P60-201ENST00000312876 1297 ntBASIC20.89■□□□□ 0.93
CDH20Q9HBT6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.89■□□□□ 0.93
CDH20Q9HBT6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH20Q9HBT6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH20Q9HBT6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH20Q9HBT6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH20Q9HBT6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH20Q9HBT6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CDH20Q9HBT6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH20Q9HBT6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH20Q9HBT6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH20Q9HBT6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH20Q9HBT6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.88■□□□□ 0.93
CDH20Q9HBT6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH20Q9HBT6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CDH20Q9HBT6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH20Q9HBT6 AC018755.3-202ENST00000596210 929 ntBASIC20.87■□□□□ 0.93
CDH20Q9HBT6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CDH20Q9HBT6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CDH20Q9HBT6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH20Q9HBT6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH20Q9HBT6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CDH20Q9HBT6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH20Q9HBT6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CDH20Q9HBT6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH20Q9HBT6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.85■□□□□ 0.93
CDH20Q9HBT6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDH20Q9HBT6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH20Q9HBT6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH20Q9HBT6 AC091060.1-201ENST00000623524 1766 ntBASIC20.85■□□□□ 0.93
CDH20Q9HBT6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH20Q9HBT6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH20Q9HBT6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH20Q9HBT6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CDH20Q9HBT6 AC129492.7-201ENST00000622992 756 ntBASIC20.84■□□□□ 0.93
CDH20Q9HBT6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CDH20Q9HBT6 ERN1-208ENST00000606895 2068 ntBASIC20.84■□□□□ 0.93
CDH20Q9HBT6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDH20Q9HBT6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.83■□□□□ 0.93
CDH20Q9HBT6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDH20Q9HBT6 DUX4L9-201ENST00000449051 1259 ntBASIC20.83■□□□□ 0.93
CDH20Q9HBT6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CDH20Q9HBT6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH20Q9HBT6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
CDH20Q9HBT6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH20Q9HBT6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDH20Q9HBT6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
CDH20Q9HBT6 KRT18P10-201ENST00000388836 1287 ntBASIC20.82■□□□□ 0.92
CDH20Q9HBT6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH20Q9HBT6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDH20Q9HBT6 MIR6765-201ENST00000614092 87 ntBASIC20.82■□□□□ 0.92
CDH20Q9HBT6 AC012354.3-201ENST00000623734 483 ntBASIC20.82■□□□□ 0.92
CDH20Q9HBT6 AC010501.1-201ENST00000606270 1962 ntBASIC20.82■□□□□ 0.92
CDH20Q9HBT6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.82■□□□□ 0.92
CDH20Q9HBT6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH20Q9HBT6 AC145676.1-201ENST00000514988 2004 ntBASIC20.82■□□□□ 0.92
CDH20Q9HBT6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CDH20Q9HBT6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CDH20Q9HBT6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH20Q9HBT6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH20Q9HBT6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.81■□□□□ 0.92
CDH20Q9HBT6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH20Q9HBT6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CDH20Q9HBT6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.81■□□□□ 0.92
CDH20Q9HBT6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.81■□□□□ 0.92
CDH20Q9HBT6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH20Q9HBT6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH20Q9HBT6 SPCS2P3-201ENST00000500401 656 ntBASIC20.8■□□□□ 0.92
CDH20Q9HBT6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH20Q9HBT6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.8■□□□□ 0.92
CDH20Q9HBT6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms