Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ELL3Q9HB65 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ELL3Q9HB65 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
ELL3Q9HB65 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ELL3Q9HB65 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ELL3Q9HB65 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ELL3Q9HB65 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ELL3Q9HB65 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.73■□□□□ 0.91
ELL3Q9HB65 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ELL3Q9HB65 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ELL3Q9HB65 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ELL3Q9HB65 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.73■□□□□ 0.91
ELL3Q9HB65 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ELL3Q9HB65 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.72■□□□□ 0.91
ELL3Q9HB65 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ELL3Q9HB65 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ELL3Q9HB65 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ELL3Q9HB65 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.72■□□□□ 0.91
ELL3Q9HB65 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
ELL3Q9HB65 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ELL3Q9HB65 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ELL3Q9HB65 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ELL3Q9HB65 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ELL3Q9HB65 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ELL3Q9HB65 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ELL3Q9HB65 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.71■□□□□ 0.91
ELL3Q9HB65 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ELL3Q9HB65 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ELL3Q9HB65 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ELL3Q9HB65 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ELL3Q9HB65 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ELL3Q9HB65 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ELL3Q9HB65 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ELL3Q9HB65 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.71■□□□□ 0.91
ELL3Q9HB65 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ELL3Q9HB65 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ELL3Q9HB65 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ELL3Q9HB65 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ELL3Q9HB65 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ELL3Q9HB65 MIR4449-201ENST00000578365 66 ntBASIC20.7■□□□□ 0.9
ELL3Q9HB65 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ELL3Q9HB65 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ELL3Q9HB65 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ELL3Q9HB65 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ELL3Q9HB65 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ELL3Q9HB65 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.69■□□□□ 0.9
ELL3Q9HB65 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ELL3Q9HB65 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ELL3Q9HB65 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
ELL3Q9HB65 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.69■□□□□ 0.9
ELL3Q9HB65 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ELL3Q9HB65 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ELL3Q9HB65 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.69■□□□□ 0.9
ELL3Q9HB65 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ELL3Q9HB65 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ELL3Q9HB65 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ELL3Q9HB65 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ELL3Q9HB65 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ELL3Q9HB65 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ELL3Q9HB65 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ELL3Q9HB65 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.69■□□□□ 0.9
ELL3Q9HB65 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ELL3Q9HB65 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ELL3Q9HB65 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ELL3Q9HB65 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ELL3Q9HB65 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ELL3Q9HB65 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.68■□□□□ 0.9
ELL3Q9HB65 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ELL3Q9HB65 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ELL3Q9HB65 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ELL3Q9HB65 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ELL3Q9HB65 AL359504.2-201ENST00000605506 1601 ntBASIC20.67■□□□□ 0.9
ELL3Q9HB65 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.67■□□□□ 0.9
ELL3Q9HB65 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.67■□□□□ 0.9
ELL3Q9HB65 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
ELL3Q9HB65 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ELL3Q9HB65 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ELL3Q9HB65 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ELL3Q9HB65 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ELL3Q9HB65 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ELL3Q9HB65 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.67■□□□□ 0.9
ELL3Q9HB65 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ELL3Q9HB65 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ELL3Q9HB65 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ELL3Q9HB65 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ELL3Q9HB65 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
ELL3Q9HB65 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ELL3Q9HB65 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.66■□□□□ 0.9
ELL3Q9HB65 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ELL3Q9HB65 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ELL3Q9HB65 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ELL3Q9HB65 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ELL3Q9HB65 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
ELL3Q9HB65 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ELL3Q9HB65 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.65■□□□□ 0.9
ELL3Q9HB65 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ELL3Q9HB65 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.65■□□□□ 0.9
ELL3Q9HB65 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ELL3Q9HB65 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ELL3Q9HB65 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms