Protein–RNA interactions for Protein: Q96A44

SPSB4, SPRY domain-containing SOCS box protein 4, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4Q96A44 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SPSB4Q96A44 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPSB4Q96A44 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPSB4Q96A44 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPSB4Q96A44 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPSB4Q96A44 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.72■□□□□ 0.91
SPSB4Q96A44 AC093536.1-201ENST00000569153 554 ntBASIC20.72■□□□□ 0.91
SPSB4Q96A44 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPSB4Q96A44 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.71■□□□□ 0.91
SPSB4Q96A44 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.71■□□□□ 0.91
SPSB4Q96A44 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.71■□□□□ 0.91
SPSB4Q96A44 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPSB4Q96A44 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPSB4Q96A44 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SPSB4Q96A44 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
SPSB4Q96A44 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.7■□□□□ 0.91
SPSB4Q96A44 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.7■□□□□ 0.9
SPSB4Q96A44 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.7■□□□□ 0.9
SPSB4Q96A44 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.7■□□□□ 0.9
SPSB4Q96A44 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.7■□□□□ 0.9
SPSB4Q96A44 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPSB4Q96A44 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPSB4Q96A44 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPSB4Q96A44 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPSB4Q96A44 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
SPSB4Q96A44 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPSB4Q96A44 RNF126P1-201ENST00000567452 1320 ntBASIC20.69■□□□□ 0.9
SPSB4Q96A44 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPSB4Q96A44 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPSB4Q96A44 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPSB4Q96A44 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPSB4Q96A44 RAP2CP1-202ENST00000605179 643 ntBASIC20.68■□□□□ 0.9
SPSB4Q96A44 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPSB4Q96A44 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPSB4Q96A44 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPSB4Q96A44 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.67■□□□□ 0.9
SPSB4Q96A44 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPSB4Q96A44 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPSB4Q96A44 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPSB4Q96A44 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPSB4Q96A44 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPSB4Q96A44 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPSB4Q96A44 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SPSB4Q96A44 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPSB4Q96A44 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPSB4Q96A44 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPSB4Q96A44 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPSB4Q96A44 AC097639.1-201ENST00000565519 1891 ntBASIC20.66■□□□□ 0.9
SPSB4Q96A44 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPSB4Q96A44 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPSB4Q96A44 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.65■□□□□ 0.9
SPSB4Q96A44 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPSB4Q96A44 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.65■□□□□ 0.9
SPSB4Q96A44 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPSB4Q96A44 AC026202.3-201ENST00000600805 1127 ntBASIC20.65■□□□□ 0.9
SPSB4Q96A44 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPSB4Q96A44 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.64■□□□□ 0.9
SPSB4Q96A44 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.64■□□□□ 0.9
SPSB4Q96A44 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SPSB4Q96A44 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPSB4Q96A44 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPSB4Q96A44 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.63■□□□□ 0.89
SPSB4Q96A44 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPSB4Q96A44 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.63■□□□□ 0.89
SPSB4Q96A44 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPSB4Q96A44 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPSB4Q96A44 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPSB4Q96A44 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.62■□□□□ 0.89
SPSB4Q96A44 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SPSB4Q96A44 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
SPSB4Q96A44 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SPSB4Q96A44 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPSB4Q96A44 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPSB4Q96A44 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPSB4Q96A44 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.62■□□□□ 0.89
SPSB4Q96A44 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SPSB4Q96A44 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPSB4Q96A44 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPSB4Q96A44 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPSB4Q96A44 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPSB4Q96A44 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPSB4Q96A44 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPSB4Q96A44 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SPSB4Q96A44 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPSB4Q96A44 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPSB4Q96A44 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
SPSB4Q96A44 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPSB4Q96A44 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPSB4Q96A44 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPSB4Q96A44 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPSB4Q96A44 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPSB4Q96A44 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.59■□□□□ 0.89
SPSB4Q96A44 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPSB4Q96A44 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
SPSB4Q96A44 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPSB4Q96A44 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPSB4Q96A44 AC142381.3-201ENST00000568208 1670 ntBASIC20.58■□□□□ 0.89
SPSB4Q96A44 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.58■□□□□ 0.89
SPSB4Q96A44 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPSB4Q96A44 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms