Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC034268.1-201ENST00000441047 882 ntBASIC22.47■■□□□ 1.19
CHD6Q8TD26 AL136162.1-201ENST00000607711 1078 ntBASIC22.47■■□□□ 1.19
CHD6Q8TD26 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHD6Q8TD26 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHD6Q8TD26 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHD6Q8TD26 AL161658.1-201ENST00000623641 1967 ntBASIC22.46■■□□□ 1.19
CHD6Q8TD26 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.46■■□□□ 1.19
CHD6Q8TD26 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHD6Q8TD26 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CHD6Q8TD26 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.45■■□□□ 1.19
CHD6Q8TD26 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
CHD6Q8TD26 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.45■■□□□ 1.19
CHD6Q8TD26 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHD6Q8TD26 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHD6Q8TD26 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CHD6Q8TD26 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHD6Q8TD26 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CHD6Q8TD26 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.44■■□□□ 1.18
CHD6Q8TD26 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CHD6Q8TD26 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CHD6Q8TD26 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.44■■□□□ 1.18
CHD6Q8TD26 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.44■■□□□ 1.18
CHD6Q8TD26 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHD6Q8TD26 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CHD6Q8TD26 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHD6Q8TD26 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHD6Q8TD26 HLA-L-209ENST00000420110 1011 ntBASIC22.43■■□□□ 1.18
CHD6Q8TD26 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.43■■□□□ 1.18
CHD6Q8TD26 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHD6Q8TD26 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CHD6Q8TD26 AP001330.3-201ENST00000520123 633 ntBASIC22.43■■□□□ 1.18
CHD6Q8TD26 RASA4CP-201ENST00000424092 1398 ntBASIC22.42■■□□□ 1.18
CHD6Q8TD26 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CHD6Q8TD26 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.42■■□□□ 1.18
CHD6Q8TD26 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CHD6Q8TD26 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.42■■□□□ 1.18
CHD6Q8TD26 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHD6Q8TD26 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
CHD6Q8TD26 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
CHD6Q8TD26 AL137784.2-201ENST00000607332 1000 ntBASIC22.41■■□□□ 1.18
CHD6Q8TD26 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CHD6Q8TD26 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CHD6Q8TD26 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.41■■□□□ 1.18
CHD6Q8TD26 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.41■■□□□ 1.18
CHD6Q8TD26 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.41■■□□□ 1.18
CHD6Q8TD26 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.41■■□□□ 1.18
CHD6Q8TD26 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHD6Q8TD26 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHD6Q8TD26 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CHD6Q8TD26 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.4■■□□□ 1.18
CHD6Q8TD26 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHD6Q8TD26 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHD6Q8TD26 AC091305.1-201ENST00000479476 895 ntBASIC22.4■■□□□ 1.18
CHD6Q8TD26 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.4■■□□□ 1.18
CHD6Q8TD26 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.39■■□□□ 1.18
CHD6Q8TD26 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.39■■□□□ 1.18
CHD6Q8TD26 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.39■■□□□ 1.18
CHD6Q8TD26 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.18
CHD6Q8TD26 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHD6Q8TD26 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.39■■□□□ 1.17
CHD6Q8TD26 MTDHP2-201ENST00000601468 714 ntBASIC22.39■■□□□ 1.17
CHD6Q8TD26 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.38■■□□□ 1.17
CHD6Q8TD26 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.38■■□□□ 1.17
CHD6Q8TD26 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.38■■□□□ 1.17
CHD6Q8TD26 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.38■■□□□ 1.17
CHD6Q8TD26 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHD6Q8TD26 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.38■■□□□ 1.17
CHD6Q8TD26 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.38■■□□□ 1.17
CHD6Q8TD26 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.38■■□□□ 1.17
CHD6Q8TD26 MIR4281-201ENST00000580852 62 ntBASIC22.38■■□□□ 1.17
CHD6Q8TD26 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CHD6Q8TD26 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CHD6Q8TD26 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CHD6Q8TD26 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD6Q8TD26 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CHD6Q8TD26 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.37■■□□□ 1.17
CHD6Q8TD26 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD6Q8TD26 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CHD6Q8TD26 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD6Q8TD26 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD6Q8TD26 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD6Q8TD26 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.37■■□□□ 1.17
CHD6Q8TD26 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CHD6Q8TD26 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD6Q8TD26 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD6Q8TD26 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD6Q8TD26 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CHD6Q8TD26 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CHD6Q8TD26 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.36■■□□□ 1.17
CHD6Q8TD26 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.36■■□□□ 1.17
CHD6Q8TD26 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.36■■□□□ 1.17
CHD6Q8TD26 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC22.35■■□□□ 1.17
CHD6Q8TD26 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.35■■□□□ 1.17
CHD6Q8TD26 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHD6Q8TD26 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.35■■□□□ 1.17
CHD6Q8TD26 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD6Q8TD26 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD6Q8TD26 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD6Q8TD26 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.34■■□□□ 1.17
CHD6Q8TD26 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms