Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.88■■□□□ 1.57
PCDH19Q8TAB3 ABHD17AP5-201ENST00000580133 923 ntBASIC24.88■■□□□ 1.57
PCDH19Q8TAB3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDH19Q8TAB3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDH19Q8TAB3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH19Q8TAB3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH19Q8TAB3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH19Q8TAB3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
PCDH19Q8TAB3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.87■■□□□ 1.57
PCDH19Q8TAB3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH19Q8TAB3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDH19Q8TAB3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDH19Q8TAB3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.86■■□□□ 1.57
PCDH19Q8TAB3 AC093536.1-201ENST00000569153 554 ntBASIC24.86■■□□□ 1.57
PCDH19Q8TAB3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDH19Q8TAB3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDH19Q8TAB3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH19Q8TAB3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH19Q8TAB3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
PCDH19Q8TAB3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDH19Q8TAB3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH19Q8TAB3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH19Q8TAB3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH19Q8TAB3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.84■■□□□ 1.57
PCDH19Q8TAB3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDH19Q8TAB3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDH19Q8TAB3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDH19Q8TAB3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
PCDH19Q8TAB3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
PCDH19Q8TAB3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.83■■□□□ 1.57
PCDH19Q8TAB3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDH19Q8TAB3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH19Q8TAB3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH19Q8TAB3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH19Q8TAB3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH19Q8TAB3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH19Q8TAB3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
PCDH19Q8TAB3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDH19Q8TAB3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDH19Q8TAB3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDH19Q8TAB3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
PCDH19Q8TAB3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDH19Q8TAB3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDH19Q8TAB3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.8■■□□□ 1.56
PCDH19Q8TAB3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH19Q8TAB3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH19Q8TAB3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH19Q8TAB3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH19Q8TAB3 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDH19Q8TAB3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.79■■□□□ 1.56
PCDH19Q8TAB3 RAP2CP1-202ENST00000605179 643 ntBASIC24.79■■□□□ 1.56
PCDH19Q8TAB3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH19Q8TAB3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH19Q8TAB3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
PCDH19Q8TAB3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDH19Q8TAB3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
PCDH19Q8TAB3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
PCDH19Q8TAB3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH19Q8TAB3 AC026202.3-201ENST00000600805 1127 ntBASIC24.78■■□□□ 1.56
PCDH19Q8TAB3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH19Q8TAB3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH19Q8TAB3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH19Q8TAB3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
PCDH19Q8TAB3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
PCDH19Q8TAB3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDH19Q8TAB3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH19Q8TAB3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH19Q8TAB3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH19Q8TAB3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH19Q8TAB3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH19Q8TAB3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH19Q8TAB3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH19Q8TAB3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
PCDH19Q8TAB3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH19Q8TAB3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH19Q8TAB3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH19Q8TAB3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH19Q8TAB3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
PCDH19Q8TAB3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH19Q8TAB3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH19Q8TAB3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDH19Q8TAB3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH19Q8TAB3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDH19Q8TAB3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
PCDH19Q8TAB3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.74■■□□□ 1.55
PCDH19Q8TAB3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
PCDH19Q8TAB3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH19Q8TAB3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH19Q8TAB3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDH19Q8TAB3 AC097639.1-201ENST00000565519 1891 ntBASIC24.73■■□□□ 1.55
PCDH19Q8TAB3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH19Q8TAB3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH19Q8TAB3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH19Q8TAB3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH19Q8TAB3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH19Q8TAB3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH19Q8TAB3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH19Q8TAB3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH19Q8TAB3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH19Q8TAB3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms