Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.12■■□□□ 1.29
HIPK4Q8NE63 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HIPK4Q8NE63 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
HIPK4Q8NE63 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HIPK4Q8NE63 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HIPK4Q8NE63 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HIPK4Q8NE63 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HIPK4Q8NE63 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HIPK4Q8NE63 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
HIPK4Q8NE63 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
HIPK4Q8NE63 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HIPK4Q8NE63 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.1■■□□□ 1.29
HIPK4Q8NE63 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.09■■□□□ 1.29
HIPK4Q8NE63 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HIPK4Q8NE63 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HIPK4Q8NE63 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HIPK4Q8NE63 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.09■■□□□ 1.29
HIPK4Q8NE63 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HIPK4Q8NE63 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HIPK4Q8NE63 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HIPK4Q8NE63 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HIPK4Q8NE63 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.09■■□□□ 1.29
HIPK4Q8NE63 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
HIPK4Q8NE63 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HIPK4Q8NE63 WHAMMP3-201ENST00000611636 1609 ntBASIC23.08■■□□□ 1.29
HIPK4Q8NE63 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.08■■□□□ 1.29
HIPK4Q8NE63 DUX4L29-201ENST00000425409 679 ntBASIC23.08■■□□□ 1.29
HIPK4Q8NE63 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.08■■□□□ 1.29
HIPK4Q8NE63 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
HIPK4Q8NE63 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.07■■□□□ 1.28
HIPK4Q8NE63 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.07■■□□□ 1.28
HIPK4Q8NE63 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.07■■□□□ 1.28
HIPK4Q8NE63 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.07■■□□□ 1.28
HIPK4Q8NE63 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HIPK4Q8NE63 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HIPK4Q8NE63 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HIPK4Q8NE63 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HIPK4Q8NE63 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HIPK4Q8NE63 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.06■■□□□ 1.28
HIPK4Q8NE63 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
HIPK4Q8NE63 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HIPK4Q8NE63 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HIPK4Q8NE63 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HIPK4Q8NE63 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.05■■□□□ 1.28
HIPK4Q8NE63 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.05■■□□□ 1.28
HIPK4Q8NE63 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HIPK4Q8NE63 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HIPK4Q8NE63 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HIPK4Q8NE63 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.03■■□□□ 1.28
HIPK4Q8NE63 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.03■■□□□ 1.28
HIPK4Q8NE63 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
HIPK4Q8NE63 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HIPK4Q8NE63 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HIPK4Q8NE63 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
HIPK4Q8NE63 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HIPK4Q8NE63 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.01■■□□□ 1.27
HIPK4Q8NE63 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
HIPK4Q8NE63 AC012676.1-201ENST00000574705 1949 ntBASIC23■■□□□ 1.27
HIPK4Q8NE63 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
HIPK4Q8NE63 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
HIPK4Q8NE63 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23■■□□□ 1.27
HIPK4Q8NE63 LINC01124-201ENST00000409786 2117 ntBASIC23■■□□□ 1.27
HIPK4Q8NE63 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
HIPK4Q8NE63 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23■■□□□ 1.27
HIPK4Q8NE63 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
HIPK4Q8NE63 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
HIPK4Q8NE63 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HIPK4Q8NE63 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HIPK4Q8NE63 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HIPK4Q8NE63 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HIPK4Q8NE63 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HIPK4Q8NE63 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HIPK4Q8NE63 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
HIPK4Q8NE63 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.98■■□□□ 1.27
HIPK4Q8NE63 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
HIPK4Q8NE63 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.97■■□□□ 1.27
HIPK4Q8NE63 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HIPK4Q8NE63 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.97■■□□□ 1.27
HIPK4Q8NE63 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HIPK4Q8NE63 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.96■■□□□ 1.27
HIPK4Q8NE63 AC068473.5-201ENST00000616428 2072 ntBASIC22.96■■□□□ 1.27
HIPK4Q8NE63 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
HIPK4Q8NE63 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HIPK4Q8NE63 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HIPK4Q8NE63 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
HIPK4Q8NE63 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
HIPK4Q8NE63 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
HIPK4Q8NE63 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
HIPK4Q8NE63 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.95■■□□□ 1.26
HIPK4Q8NE63 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.95■■□□□ 1.26
HIPK4Q8NE63 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.95■■□□□ 1.26
HIPK4Q8NE63 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
HIPK4Q8NE63 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
HIPK4Q8NE63 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
HIPK4Q8NE63 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
HIPK4Q8NE63 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.94■■□□□ 1.26
HIPK4Q8NE63 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
HIPK4Q8NE63 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.94■■□□□ 1.26
HIPK4Q8NE63 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.93■■□□□ 1.26
HIPK4Q8NE63 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms