Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF439Q8NDP4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF439Q8NDP4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF439Q8NDP4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF439Q8NDP4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF439Q8NDP4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF439Q8NDP4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ZNF439Q8NDP4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ZNF439Q8NDP4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF439Q8NDP4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF439Q8NDP4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF439Q8NDP4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF439Q8NDP4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF439Q8NDP4 ECEL1P2-201ENST00000461596 1295 ntBASIC19.79■□□□□ 0.76
ZNF439Q8NDP4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ZNF439Q8NDP4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF439Q8NDP4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF439Q8NDP4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ZNF439Q8NDP4 AC096887.2-201ENST00000623443 1957 ntBASIC19.78■□□□□ 0.76
ZNF439Q8NDP4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.78■□□□□ 0.76
ZNF439Q8NDP4 SMPD5-203ENST00000639008 1464 ntBASIC19.78■□□□□ 0.76
ZNF439Q8NDP4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF439Q8NDP4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ZNF439Q8NDP4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF439Q8NDP4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF439Q8NDP4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF439Q8NDP4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ZNF439Q8NDP4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF439Q8NDP4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.77■□□□□ 0.76
ZNF439Q8NDP4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNF439Q8NDP4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
ZNF439Q8NDP4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF439Q8NDP4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF439Q8NDP4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.76■□□□□ 0.75
ZNF439Q8NDP4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF439Q8NDP4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF439Q8NDP4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF439Q8NDP4 AC020928.2-201ENST00000588717 2197 ntBASIC19.76■□□□□ 0.75
ZNF439Q8NDP4 MIR3960-201ENST00000583311 91 ntBASIC19.76■□□□□ 0.75
ZNF439Q8NDP4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF439Q8NDP4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF439Q8NDP4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF439Q8NDP4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF439Q8NDP4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF439Q8NDP4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF439Q8NDP4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF439Q8NDP4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ZNF439Q8NDP4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.75■□□□□ 0.75
ZNF439Q8NDP4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF439Q8NDP4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF439Q8NDP4 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF439Q8NDP4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF439Q8NDP4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ZNF439Q8NDP4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF439Q8NDP4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF439Q8NDP4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ZNF439Q8NDP4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF439Q8NDP4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ZNF439Q8NDP4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF439Q8NDP4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF439Q8NDP4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF439Q8NDP4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ZNF439Q8NDP4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF439Q8NDP4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF439Q8NDP4 GPX1-201ENST00000419349 1106 ntBASIC19.72■□□□□ 0.75
ZNF439Q8NDP4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF439Q8NDP4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF439Q8NDP4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ZNF439Q8NDP4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNF439Q8NDP4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF439Q8NDP4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
ZNF439Q8NDP4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF439Q8NDP4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF439Q8NDP4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF439Q8NDP4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF439Q8NDP4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.7■□□□□ 0.74
ZNF439Q8NDP4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ZNF439Q8NDP4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF439Q8NDP4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF439Q8NDP4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF439Q8NDP4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
ZNF439Q8NDP4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ZNF439Q8NDP4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF439Q8NDP4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF439Q8NDP4 RP9P-202ENST00000450133 1212 ntBASIC19.69■□□□□ 0.74
ZNF439Q8NDP4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF439Q8NDP4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ZNF439Q8NDP4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF439Q8NDP4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF439Q8NDP4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ZNF439Q8NDP4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
ZNF439Q8NDP4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ZNF439Q8NDP4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF439Q8NDP4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF439Q8NDP4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF439Q8NDP4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF439Q8NDP4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF439Q8NDP4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF439Q8NDP4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF439Q8NDP4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms