Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LRTM2Q8N967 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRTM2Q8N967 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRTM2Q8N967 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.64■□□□□ 0.74
LRTM2Q8N967 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRTM2Q8N967 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LRTM2Q8N967 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM2Q8N967 AC141586.4-201ENST00000624558 1573 ntBASIC19.64■□□□□ 0.73
LRTM2Q8N967 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM2Q8N967 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LRTM2Q8N967 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM2Q8N967 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM2Q8N967 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.63■□□□□ 0.73
LRTM2Q8N967 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.63■□□□□ 0.73
LRTM2Q8N967 AC068473.5-201ENST00000616428 2072 ntBASIC19.63■□□□□ 0.73
LRTM2Q8N967 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM2Q8N967 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM2Q8N967 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM2Q8N967 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.63■□□□□ 0.73
LRTM2Q8N967 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM2Q8N967 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM2Q8N967 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM2Q8N967 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM2Q8N967 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LRTM2Q8N967 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.62■□□□□ 0.73
LRTM2Q8N967 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM2Q8N967 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM2Q8N967 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.62■□□□□ 0.73
LRTM2Q8N967 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.62■□□□□ 0.73
LRTM2Q8N967 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LRTM2Q8N967 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM2Q8N967 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM2Q8N967 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
LRTM2Q8N967 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM2Q8N967 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.61■□□□□ 0.73
LRTM2Q8N967 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM2Q8N967 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM2Q8N967 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LRTM2Q8N967 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM2Q8N967 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM2Q8N967 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM2Q8N967 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.6■□□□□ 0.73
LRTM2Q8N967 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRTM2Q8N967 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.6■□□□□ 0.73
LRTM2Q8N967 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.6■□□□□ 0.73
LRTM2Q8N967 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRTM2Q8N967 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LRTM2Q8N967 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.59■□□□□ 0.73
LRTM2Q8N967 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRTM2Q8N967 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRTM2Q8N967 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRTM2Q8N967 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRTM2Q8N967 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.59■□□□□ 0.73
LRTM2Q8N967 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LRTM2Q8N967 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRTM2Q8N967 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRTM2Q8N967 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
LRTM2Q8N967 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
LRTM2Q8N967 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRTM2Q8N967 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.58■□□□□ 0.73
LRTM2Q8N967 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM2Q8N967 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM2Q8N967 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM2Q8N967 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRTM2Q8N967 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.57■□□□□ 0.72
LRTM2Q8N967 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.57■□□□□ 0.72
LRTM2Q8N967 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LRTM2Q8N967 SLC6A10P-202ENST00000431994 2058 ntBASIC19.57■□□□□ 0.72
LRTM2Q8N967 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRTM2Q8N967 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRTM2Q8N967 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM2Q8N967 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM2Q8N967 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM2Q8N967 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM2Q8N967 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM2Q8N967 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRTM2Q8N967 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRTM2Q8N967 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.55■□□□□ 0.72
LRTM2Q8N967 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRTM2Q8N967 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRTM2Q8N967 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.55■□□□□ 0.72
LRTM2Q8N967 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.55■□□□□ 0.72
LRTM2Q8N967 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.55■□□□□ 0.72
LRTM2Q8N967 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRTM2Q8N967 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LRTM2Q8N967 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRTM2Q8N967 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.54■□□□□ 0.72
LRTM2Q8N967 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LRTM2Q8N967 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LRTM2Q8N967 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRTM2Q8N967 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM2Q8N967 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM2Q8N967 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM2Q8N967 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.53■□□□□ 0.72
LRTM2Q8N967 AP006261.1-201ENST00000584783 668 ntBASIC19.53■□□□□ 0.72
LRTM2Q8N967 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRTM2Q8N967 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRTM2Q8N967 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRTM2Q8N967 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRTM2Q8N967 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms