Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AC120024.1-201ENST00000562672 995 ntBASIC18.9■□□□□ 0.62
C3orf56Q8N813 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C3orf56Q8N813 AL117332.1-201ENST00000622628 974 ntBASIC18.9■□□□□ 0.62
C3orf56Q8N813 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C3orf56Q8N813 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C3orf56Q8N813 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
C3orf56Q8N813 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.89■□□□□ 0.62
C3orf56Q8N813 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
C3orf56Q8N813 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
C3orf56Q8N813 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.89■□□□□ 0.61
C3orf56Q8N813 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
C3orf56Q8N813 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.89■□□□□ 0.61
C3orf56Q8N813 AC133561.4-201ENST00000566112 224 ntBASIC18.89■□□□□ 0.61
C3orf56Q8N813 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.89■□□□□ 0.61
C3orf56Q8N813 MTDHP2-201ENST00000601468 714 ntBASIC18.89■□□□□ 0.61
C3orf56Q8N813 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C3orf56Q8N813 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C3orf56Q8N813 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
C3orf56Q8N813 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
C3orf56Q8N813 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
C3orf56Q8N813 ST7-AS1-201ENST00000456775 1889 ntBASIC18.88■□□□□ 0.61
C3orf56Q8N813 MIR3621-201ENST00000580529 85 ntBASIC18.88■□□□□ 0.61
C3orf56Q8N813 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C3orf56Q8N813 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
C3orf56Q8N813 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C3orf56Q8N813 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.87■□□□□ 0.61
C3orf56Q8N813 ABCB10P3-201ENST00000561950 2166 ntBASIC18.87■□□□□ 0.61
C3orf56Q8N813 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.87■□□□□ 0.61
C3orf56Q8N813 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C3orf56Q8N813 MIR6724-1-201ENST00000616420 92 ntBASIC18.87■□□□□ 0.61
C3orf56Q8N813 MIR6724-2-201ENST00000616483 92 ntBASIC18.87■□□□□ 0.61
C3orf56Q8N813 MIR6724-4-201ENST00000617390 92 ntBASIC18.87■□□□□ 0.61
C3orf56Q8N813 MIR6724-3-201ENST00000622482 92 ntBASIC18.87■□□□□ 0.61
C3orf56Q8N813 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C3orf56Q8N813 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.86■□□□□ 0.61
C3orf56Q8N813 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C3orf56Q8N813 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.86■□□□□ 0.61
C3orf56Q8N813 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C3orf56Q8N813 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.86■□□□□ 0.61
C3orf56Q8N813 RARRES2P6-201ENST00000567333 442 ntBASIC18.86■□□□□ 0.61
C3orf56Q8N813 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C3orf56Q8N813 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C3orf56Q8N813 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C3orf56Q8N813 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C3orf56Q8N813 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.85■□□□□ 0.61
C3orf56Q8N813 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C3orf56Q8N813 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C3orf56Q8N813 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.85■□□□□ 0.61
C3orf56Q8N813 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.85■□□□□ 0.61
C3orf56Q8N813 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.85■□□□□ 0.61
C3orf56Q8N813 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.85■□□□□ 0.61
C3orf56Q8N813 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C3orf56Q8N813 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.85■□□□□ 0.61
C3orf56Q8N813 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.85■□□□□ 0.61
C3orf56Q8N813 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.85■□□□□ 0.61
C3orf56Q8N813 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
C3orf56Q8N813 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
C3orf56Q8N813 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.84■□□□□ 0.61
C3orf56Q8N813 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C3orf56Q8N813 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.84■□□□□ 0.61
C3orf56Q8N813 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C3orf56Q8N813 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C3orf56Q8N813 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C3orf56Q8N813 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
C3orf56Q8N813 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C3orf56Q8N813 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.83■□□□□ 0.6
C3orf56Q8N813 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.83■□□□□ 0.6
C3orf56Q8N813 AC104564.3-201ENST00000582367 638 ntBASIC18.83■□□□□ 0.6
C3orf56Q8N813 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
C3orf56Q8N813 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.82■□□□□ 0.6
C3orf56Q8N813 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.82■□□□□ 0.6
C3orf56Q8N813 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.82■□□□□ 0.6
C3orf56Q8N813 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C3orf56Q8N813 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C3orf56Q8N813 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C3orf56Q8N813 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C3orf56Q8N813 AC142381.2-201ENST00000566120 298 ntBASIC18.81■□□□□ 0.6
C3orf56Q8N813 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.81■□□□□ 0.6
C3orf56Q8N813 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C3orf56Q8N813 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.81■□□□□ 0.6
C3orf56Q8N813 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC18.8■□□□□ 0.6
C3orf56Q8N813 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C3orf56Q8N813 ZNRF2P3-201ENST00000424200 374 ntBASIC18.8■□□□□ 0.6
C3orf56Q8N813 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C3orf56Q8N813 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C3orf56Q8N813 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C3orf56Q8N813 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
C3orf56Q8N813 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
C3orf56Q8N813 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C3orf56Q8N813 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C3orf56Q8N813 MIR4466-201ENST00000606121 54 ntBASIC18.79■□□□□ 0.6
C3orf56Q8N813 MIR5787-201ENST00000611784 55 ntBASIC18.79■□□□□ 0.6
C3orf56Q8N813 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C3orf56Q8N813 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C3orf56Q8N813 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
C3orf56Q8N813 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.78■□□□□ 0.6
C3orf56Q8N813 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
C3orf56Q8N813 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C3orf56Q8N813 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.78■□□□□ 0.6
C3orf56Q8N813 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms