Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CPNE9Q8IYJ1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CPNE9Q8IYJ1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CPNE9Q8IYJ1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CPNE9Q8IYJ1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.75■■□□□ 1.39
CPNE9Q8IYJ1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CPNE9Q8IYJ1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPNE9Q8IYJ1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.74■■□□□ 1.39
CPNE9Q8IYJ1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.74■■□□□ 1.39
CPNE9Q8IYJ1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CPNE9Q8IYJ1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.74■■□□□ 1.39
CPNE9Q8IYJ1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.74■■□□□ 1.39
CPNE9Q8IYJ1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.74■■□□□ 1.39
CPNE9Q8IYJ1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CPNE9Q8IYJ1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPNE9Q8IYJ1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPNE9Q8IYJ1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CPNE9Q8IYJ1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPNE9Q8IYJ1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CPNE9Q8IYJ1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.73■■□□□ 1.39
CPNE9Q8IYJ1 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.73■■□□□ 1.39
CPNE9Q8IYJ1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.73■■□□□ 1.39
CPNE9Q8IYJ1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPNE9Q8IYJ1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CPNE9Q8IYJ1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CPNE9Q8IYJ1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CPNE9Q8IYJ1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CPNE9Q8IYJ1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.71■■□□□ 1.39
CPNE9Q8IYJ1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
CPNE9Q8IYJ1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CPNE9Q8IYJ1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CPNE9Q8IYJ1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CPNE9Q8IYJ1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.7■■□□□ 1.38
CPNE9Q8IYJ1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CPNE9Q8IYJ1 RP9P-202ENST00000450133 1212 ntBASIC23.7■■□□□ 1.38
CPNE9Q8IYJ1 AC007029.1-201ENST00000604183 313 ntBASIC23.7■■□□□ 1.38
CPNE9Q8IYJ1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CPNE9Q8IYJ1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
CPNE9Q8IYJ1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CPNE9Q8IYJ1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.69■■□□□ 1.38
CPNE9Q8IYJ1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CPNE9Q8IYJ1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.69■■□□□ 1.38
CPNE9Q8IYJ1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.69■■□□□ 1.38
CPNE9Q8IYJ1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CPNE9Q8IYJ1 AC093536.1-201ENST00000569153 554 ntBASIC23.68■■□□□ 1.38
CPNE9Q8IYJ1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CPNE9Q8IYJ1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CPNE9Q8IYJ1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPNE9Q8IYJ1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPNE9Q8IYJ1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPNE9Q8IYJ1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CPNE9Q8IYJ1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPNE9Q8IYJ1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPNE9Q8IYJ1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.66■■□□□ 1.38
CPNE9Q8IYJ1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPNE9Q8IYJ1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CPNE9Q8IYJ1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CPNE9Q8IYJ1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CPNE9Q8IYJ1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.66■■□□□ 1.38
CPNE9Q8IYJ1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.65■■□□□ 1.38
CPNE9Q8IYJ1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.65■■□□□ 1.38
CPNE9Q8IYJ1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CPNE9Q8IYJ1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.65■■□□□ 1.38
CPNE9Q8IYJ1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CPNE9Q8IYJ1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.64■■□□□ 1.37
CPNE9Q8IYJ1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.64■■□□□ 1.37
CPNE9Q8IYJ1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CPNE9Q8IYJ1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
CPNE9Q8IYJ1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CPNE9Q8IYJ1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.64■■□□□ 1.37
CPNE9Q8IYJ1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CPNE9Q8IYJ1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPNE9Q8IYJ1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPNE9Q8IYJ1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.63■■□□□ 1.37
CPNE9Q8IYJ1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPNE9Q8IYJ1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
CPNE9Q8IYJ1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CPNE9Q8IYJ1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.62■■□□□ 1.37
CPNE9Q8IYJ1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CPNE9Q8IYJ1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CPNE9Q8IYJ1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CPNE9Q8IYJ1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CPNE9Q8IYJ1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CPNE9Q8IYJ1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.62■■□□□ 1.37
CPNE9Q8IYJ1 RNF126P1-201ENST00000567452 1320 ntBASIC23.61■■□□□ 1.37
CPNE9Q8IYJ1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
CPNE9Q8IYJ1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.61■■□□□ 1.37
CPNE9Q8IYJ1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.61■■□□□ 1.37
CPNE9Q8IYJ1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CPNE9Q8IYJ1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE9Q8IYJ1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE9Q8IYJ1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE9Q8IYJ1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
CPNE9Q8IYJ1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CPNE9Q8IYJ1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.59■■□□□ 1.37
CPNE9Q8IYJ1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPNE9Q8IYJ1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPNE9Q8IYJ1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CPNE9Q8IYJ1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CPNE9Q8IYJ1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms