Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ZNF440Q8IYI8 AC093536.1-201ENST00000569153 554 ntBASIC21.98■■□□□ 1.11
ZNF440Q8IYI8 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.98■■□□□ 1.11
ZNF440Q8IYI8 AC020928.2-201ENST00000588717 2197 ntBASIC21.98■■□□□ 1.11
ZNF440Q8IYI8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.97■■□□□ 1.11
ZNF440Q8IYI8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF440Q8IYI8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZNF440Q8IYI8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
ZNF440Q8IYI8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF440Q8IYI8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.96■■□□□ 1.11
ZNF440Q8IYI8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF440Q8IYI8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZNF440Q8IYI8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
ZNF440Q8IYI8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF440Q8IYI8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.95■■□□□ 1.1
ZNF440Q8IYI8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.95■■□□□ 1.1
ZNF440Q8IYI8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
ZNF440Q8IYI8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF440Q8IYI8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.95■■□□□ 1.1
ZNF440Q8IYI8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ZNF440Q8IYI8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF440Q8IYI8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
ZNF440Q8IYI8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
ZNF440Q8IYI8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
ZNF440Q8IYI8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF440Q8IYI8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.94■■□□□ 1.1
ZNF440Q8IYI8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF440Q8IYI8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.94■■□□□ 1.1
ZNF440Q8IYI8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.94■■□□□ 1.1
ZNF440Q8IYI8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZNF440Q8IYI8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
ZNF440Q8IYI8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF440Q8IYI8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZNF440Q8IYI8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
ZNF440Q8IYI8 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.93■■□□□ 1.1
ZNF440Q8IYI8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.93■■□□□ 1.1
ZNF440Q8IYI8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF440Q8IYI8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
ZNF440Q8IYI8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ZNF440Q8IYI8 RNF126P1-201ENST00000567452 1320 ntBASIC21.92■■□□□ 1.1
ZNF440Q8IYI8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF440Q8IYI8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
ZNF440Q8IYI8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ZNF440Q8IYI8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF440Q8IYI8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF440Q8IYI8 AC097639.1-201ENST00000565519 1891 ntBASIC21.92■■□□□ 1.1
ZNF440Q8IYI8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZNF440Q8IYI8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF440Q8IYI8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF440Q8IYI8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF440Q8IYI8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.91■■□□□ 1.1
ZNF440Q8IYI8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF440Q8IYI8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ZNF440Q8IYI8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF440Q8IYI8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF440Q8IYI8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
ZNF440Q8IYI8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF440Q8IYI8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ZNF440Q8IYI8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.9■■□□□ 1.1
ZNF440Q8IYI8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ZNF440Q8IYI8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
ZNF440Q8IYI8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
ZNF440Q8IYI8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ZNF440Q8IYI8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.89■■□□□ 1.1
ZNF440Q8IYI8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF440Q8IYI8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ZNF440Q8IYI8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
ZNF440Q8IYI8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF440Q8IYI8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF440Q8IYI8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.88■■□□□ 1.09
ZNF440Q8IYI8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.88■■□□□ 1.09
ZNF440Q8IYI8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF440Q8IYI8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF440Q8IYI8 RAP2CP1-202ENST00000605179 643 ntBASIC21.88■■□□□ 1.09
ZNF440Q8IYI8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF440Q8IYI8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.88■■□□□ 1.09
ZNF440Q8IYI8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ZNF440Q8IYI8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF440Q8IYI8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF440Q8IYI8 KRT18P10-201ENST00000388836 1287 ntBASIC21.87■■□□□ 1.09
ZNF440Q8IYI8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ZNF440Q8IYI8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.87■■□□□ 1.09
ZNF440Q8IYI8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
ZNF440Q8IYI8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.86■■□□□ 1.09
ZNF440Q8IYI8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ZNF440Q8IYI8 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.86■■□□□ 1.09
ZNF440Q8IYI8 AC026202.3-201ENST00000600805 1127 ntBASIC21.86■■□□□ 1.09
ZNF440Q8IYI8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ZNF440Q8IYI8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZNF440Q8IYI8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ZNF440Q8IYI8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF440Q8IYI8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.85■■□□□ 1.09
ZNF440Q8IYI8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF440Q8IYI8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF440Q8IYI8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ZNF440Q8IYI8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
ZNF440Q8IYI8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.84■■□□□ 1.09
ZNF440Q8IYI8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ZNF440Q8IYI8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
ZNF440Q8IYI8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms