Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00346Q8IVM7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00346Q8IVM7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00346Q8IVM7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00346Q8IVM7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00346Q8IVM7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00346Q8IVM7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LINC00346Q8IVM7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00346Q8IVM7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00346Q8IVM7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.2■□□□□ 0.98
LINC00346Q8IVM7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.2■□□□□ 0.98
LINC00346Q8IVM7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.2■□□□□ 0.98
LINC00346Q8IVM7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00346Q8IVM7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LINC00346Q8IVM7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00346Q8IVM7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
LINC00346Q8IVM7 AC025884.2-201ENST00000553429 711 ntBASIC21.19■□□□□ 0.98
LINC00346Q8IVM7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.19■□□□□ 0.98
LINC00346Q8IVM7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.19■□□□□ 0.98
LINC00346Q8IVM7 AC022413.1-201ENST00000624602 984 ntBASIC21.19■□□□□ 0.98
LINC00346Q8IVM7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
LINC00346Q8IVM7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.19■□□□□ 0.98
LINC00346Q8IVM7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.19■□□□□ 0.98
LINC00346Q8IVM7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LINC00346Q8IVM7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.18■□□□□ 0.98
LINC00346Q8IVM7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.18■□□□□ 0.98
LINC00346Q8IVM7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.18■□□□□ 0.98
LINC00346Q8IVM7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00346Q8IVM7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
LINC00346Q8IVM7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00346Q8IVM7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00346Q8IVM7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.17■□□□□ 0.98
LINC00346Q8IVM7 AC092296.2-201ENST00000589470 999 ntBASIC21.17■□□□□ 0.98
LINC00346Q8IVM7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00346Q8IVM7 SMPD5-203ENST00000639008 1464 ntBASIC21.17■□□□□ 0.98
LINC00346Q8IVM7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00346Q8IVM7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00346Q8IVM7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00346Q8IVM7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00346Q8IVM7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00346Q8IVM7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00346Q8IVM7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00346Q8IVM7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LINC00346Q8IVM7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00346Q8IVM7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.15■□□□□ 0.98
LINC00346Q8IVM7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LINC00346Q8IVM7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00346Q8IVM7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.15■□□□□ 0.98
LINC00346Q8IVM7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.14■□□□□ 0.98
LINC00346Q8IVM7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00346Q8IVM7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.14■□□□□ 0.97
LINC00346Q8IVM7 MIR3960-201ENST00000583311 91 ntBASIC21.14■□□□□ 0.97
LINC00346Q8IVM7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00346Q8IVM7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LINC00346Q8IVM7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00346Q8IVM7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
LINC00346Q8IVM7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00346Q8IVM7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.14■□□□□ 0.97
LINC00346Q8IVM7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LINC00346Q8IVM7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.13■□□□□ 0.97
LINC00346Q8IVM7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LINC00346Q8IVM7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00346Q8IVM7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.13■□□□□ 0.97
LINC00346Q8IVM7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00346Q8IVM7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00346Q8IVM7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00346Q8IVM7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.12■□□□□ 0.97
LINC00346Q8IVM7 MIR4449-201ENST00000578365 66 ntBASIC21.12■□□□□ 0.97
LINC00346Q8IVM7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00346Q8IVM7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00346Q8IVM7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00346Q8IVM7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00346Q8IVM7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00346Q8IVM7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00346Q8IVM7 AC022211.4-201ENST00000625094 2161 ntBASIC21.12■□□□□ 0.97
LINC00346Q8IVM7 ECEL1P2-201ENST00000461596 1295 ntBASIC21.11■□□□□ 0.97
LINC00346Q8IVM7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00346Q8IVM7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LINC00346Q8IVM7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00346Q8IVM7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.11■□□□□ 0.97
LINC00346Q8IVM7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.11■□□□□ 0.97
LINC00346Q8IVM7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
LINC00346Q8IVM7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00346Q8IVM7 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.1■□□□□ 0.97
LINC00346Q8IVM7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.1■□□□□ 0.97
LINC00346Q8IVM7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00346Q8IVM7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00346Q8IVM7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LINC00346Q8IVM7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00346Q8IVM7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00346Q8IVM7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
LINC00346Q8IVM7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.09■□□□□ 0.97
LINC00346Q8IVM7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.09■□□□□ 0.97
LINC00346Q8IVM7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00346Q8IVM7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00346Q8IVM7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00346Q8IVM7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00346Q8IVM7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00346Q8IVM7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LINC00346Q8IVM7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms