Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC25Q86WR0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC25Q86WR0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC25Q86WR0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
CCDC25Q86WR0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCDC25Q86WR0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.6■■□□□ 1.53
CCDC25Q86WR0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC25Q86WR0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC25Q86WR0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.6■■□□□ 1.53
CCDC25Q86WR0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.6■■□□□ 1.53
CCDC25Q86WR0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.6■■□□□ 1.53
CCDC25Q86WR0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.59■■□□□ 1.53
CCDC25Q86WR0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.59■■□□□ 1.53
CCDC25Q86WR0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC25Q86WR0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.58■■□□□ 1.53
CCDC25Q86WR0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC25Q86WR0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC25Q86WR0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC25Q86WR0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC25Q86WR0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC25Q86WR0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC25Q86WR0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC25Q86WR0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.58■■□□□ 1.53
CCDC25Q86WR0 LINC01971-201ENST00000617888 1048 ntBASIC24.58■■□□□ 1.53
CCDC25Q86WR0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.58■■□□□ 1.53
CCDC25Q86WR0 AL359258.2-201ENST00000564063 1566 ntBASIC24.58■■□□□ 1.52
CCDC25Q86WR0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CCDC25Q86WR0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
CCDC25Q86WR0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.57■■□□□ 1.52
CCDC25Q86WR0 AL359504.2-201ENST00000605506 1601 ntBASIC24.57■■□□□ 1.52
CCDC25Q86WR0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC25Q86WR0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC25Q86WR0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.56■■□□□ 1.52
CCDC25Q86WR0 AC008813.1-201ENST00000536597 885 ntBASIC24.56■■□□□ 1.52
CCDC25Q86WR0 DUX4L13-201ENST00000554103 1267 ntBASIC24.56■■□□□ 1.52
CCDC25Q86WR0 DUX4L15-201ENST00000611059 1267 ntBASIC24.56■■□□□ 1.52
CCDC25Q86WR0 DUX4L23-201ENST00000615195 1269 ntBASIC24.56■■□□□ 1.52
CCDC25Q86WR0 DUX4L24-201ENST00000617576 1269 ntBASIC24.56■■□□□ 1.52
CCDC25Q86WR0 DUX4L22-201ENST00000618238 1269 ntBASIC24.56■■□□□ 1.52
CCDC25Q86WR0 DUX4L20-201ENST00000619712 1269 ntBASIC24.56■■□□□ 1.52
CCDC25Q86WR0 DUX4L21-201ENST00000622058 1269 ntBASIC24.56■■□□□ 1.52
CCDC25Q86WR0 DUX4L10-201ENST00000622460 1267 ntBASIC24.56■■□□□ 1.52
CCDC25Q86WR0 DUX4L25-201ENST00000624915 1269 ntBASIC24.56■■□□□ 1.52
CCDC25Q86WR0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.56■■□□□ 1.52
CCDC25Q86WR0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC25Q86WR0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC25Q86WR0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC25Q86WR0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC25Q86WR0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC25Q86WR0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC25Q86WR0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC25Q86WR0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC25Q86WR0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC25Q86WR0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC25Q86WR0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC25Q86WR0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC25Q86WR0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC25Q86WR0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC25Q86WR0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC25Q86WR0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.53■■□□□ 1.52
CCDC25Q86WR0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC25Q86WR0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC25Q86WR0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC25Q86WR0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC25Q86WR0 AC148477.6-201ENST00000623746 465 ntBASIC24.53■■□□□ 1.52
CCDC25Q86WR0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC25Q86WR0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC25Q86WR0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC25Q86WR0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC25Q86WR0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC25Q86WR0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC25Q86WR0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC25Q86WR0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.52■■□□□ 1.52
CCDC25Q86WR0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
CCDC25Q86WR0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC25Q86WR0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC25Q86WR0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC25Q86WR0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC25Q86WR0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.51■■□□□ 1.51
CCDC25Q86WR0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC25Q86WR0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC25Q86WR0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC25Q86WR0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC25Q86WR0 LINC01124-201ENST00000409786 2117 ntBASIC24.51■■□□□ 1.51
CCDC25Q86WR0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC25Q86WR0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC25Q86WR0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC25Q86WR0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC25Q86WR0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC25Q86WR0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC25Q86WR0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC25Q86WR0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.5■■□□□ 1.51
CCDC25Q86WR0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.5■■□□□ 1.51
CCDC25Q86WR0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC25Q86WR0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC25Q86WR0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC25Q86WR0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
CCDC25Q86WR0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
CCDC25Q86WR0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC25Q86WR0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms