Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
PACS1Q6VY07 GPX1-201ENST00000419349 1106 ntBASIC24.23■■□□□ 1.47
PACS1Q6VY07 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.23■■□□□ 1.47
PACS1Q6VY07 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PACS1Q6VY07 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
PACS1Q6VY07 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PACS1Q6VY07 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.22■■□□□ 1.47
PACS1Q6VY07 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PACS1Q6VY07 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.22■■□□□ 1.47
PACS1Q6VY07 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PACS1Q6VY07 ECEL1P2-201ENST00000461596 1295 ntBASIC24.22■■□□□ 1.47
PACS1Q6VY07 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.22■■□□□ 1.47
PACS1Q6VY07 AC093323.1-202ENST00000635031 2045 ntBASIC24.22■■□□□ 1.47
PACS1Q6VY07 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PACS1Q6VY07 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
PACS1Q6VY07 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PACS1Q6VY07 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.21■■□□□ 1.47
PACS1Q6VY07 AC025884.2-201ENST00000553429 711 ntBASIC24.21■■□□□ 1.47
PACS1Q6VY07 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
PACS1Q6VY07 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PACS1Q6VY07 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PACS1Q6VY07 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.2■■□□□ 1.46
PACS1Q6VY07 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
PACS1Q6VY07 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.2■■□□□ 1.46
PACS1Q6VY07 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PACS1Q6VY07 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.2■■□□□ 1.46
PACS1Q6VY07 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PACS1Q6VY07 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PACS1Q6VY07 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
PACS1Q6VY07 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PACS1Q6VY07 AC142381.3-201ENST00000568208 1670 ntBASIC24.19■■□□□ 1.46
PACS1Q6VY07 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.19■■□□□ 1.46
PACS1Q6VY07 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.19■■□□□ 1.46
PACS1Q6VY07 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PACS1Q6VY07 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PACS1Q6VY07 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.19■■□□□ 1.46
PACS1Q6VY07 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.19■■□□□ 1.46
PACS1Q6VY07 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.18■■□□□ 1.46
PACS1Q6VY07 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PACS1Q6VY07 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.18■■□□□ 1.46
PACS1Q6VY07 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.18■■□□□ 1.46
PACS1Q6VY07 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.18■■□□□ 1.46
PACS1Q6VY07 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.18■■□□□ 1.46
PACS1Q6VY07 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.18■■□□□ 1.46
PACS1Q6VY07 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PACS1Q6VY07 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PACS1Q6VY07 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.16■■□□□ 1.46
PACS1Q6VY07 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PACS1Q6VY07 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PACS1Q6VY07 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PACS1Q6VY07 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PACS1Q6VY07 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.15■■□□□ 1.46
PACS1Q6VY07 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
PACS1Q6VY07 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PACS1Q6VY07 AC022211.4-201ENST00000625094 2161 ntBASIC24.15■■□□□ 1.46
PACS1Q6VY07 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PACS1Q6VY07 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
PACS1Q6VY07 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PACS1Q6VY07 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.14■■□□□ 1.46
PACS1Q6VY07 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PACS1Q6VY07 SMPD5-203ENST00000639008 1464 ntBASIC24.14■■□□□ 1.46
PACS1Q6VY07 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PACS1Q6VY07 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.14■■□□□ 1.45
PACS1Q6VY07 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PACS1Q6VY07 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.14■■□□□ 1.45
PACS1Q6VY07 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PACS1Q6VY07 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PACS1Q6VY07 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PACS1Q6VY07 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PACS1Q6VY07 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.13■■□□□ 1.45
PACS1Q6VY07 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.13■■□□□ 1.45
PACS1Q6VY07 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PACS1Q6VY07 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.13■■□□□ 1.45
PACS1Q6VY07 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.12■■□□□ 1.45
PACS1Q6VY07 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PACS1Q6VY07 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PACS1Q6VY07 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PACS1Q6VY07 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.12■■□□□ 1.45
PACS1Q6VY07 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PACS1Q6VY07 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PACS1Q6VY07 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.12■■□□□ 1.45
PACS1Q6VY07 RNF126P1-201ENST00000567452 1320 ntBASIC24.11■■□□□ 1.45
PACS1Q6VY07 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PACS1Q6VY07 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PACS1Q6VY07 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.11■■□□□ 1.45
PACS1Q6VY07 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.11■■□□□ 1.45
PACS1Q6VY07 AC138932.3-201ENST00000567634 1902 ntBASIC24.11■■□□□ 1.45
PACS1Q6VY07 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PACS1Q6VY07 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.11■■□□□ 1.45
PACS1Q6VY07 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PACS1Q6VY07 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PACS1Q6VY07 MIR3960-201ENST00000583311 91 ntBASIC24.1■■□□□ 1.45
PACS1Q6VY07 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
PACS1Q6VY07 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PACS1Q6VY07 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PACS1Q6VY07 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.09■■□□□ 1.45
PACS1Q6VY07 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.09■■□□□ 1.45
PACS1Q6VY07 HSD17B1P1-201ENST00000590052 955 ntBASIC24.09■■□□□ 1.45
PACS1Q6VY07 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PACS1Q6VY07 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms