Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LRIT3Q3SXY7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
LRIT3Q3SXY7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.33■■□□□ 1.81
LRIT3Q3SXY7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.33■■□□□ 1.81
LRIT3Q3SXY7 MTDHP2-201ENST00000601468 714 ntBASIC26.33■■□□□ 1.81
LRIT3Q3SXY7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.33■■□□□ 1.81
LRIT3Q3SXY7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
LRIT3Q3SXY7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.33■■□□□ 1.81
LRIT3Q3SXY7 KRT18P10-201ENST00000388836 1287 ntBASIC26.32■■□□□ 1.8
LRIT3Q3SXY7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LRIT3Q3SXY7 MIR6821-201ENST00000617625 74 ntBASIC26.32■■□□□ 1.8
LRIT3Q3SXY7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
LRIT3Q3SXY7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.31■■□□□ 1.8
LRIT3Q3SXY7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
LRIT3Q3SXY7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LRIT3Q3SXY7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.3■■□□□ 1.8
LRIT3Q3SXY7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LRIT3Q3SXY7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.29■■□□□ 1.8
LRIT3Q3SXY7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.29■■□□□ 1.8
LRIT3Q3SXY7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
LRIT3Q3SXY7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
LRIT3Q3SXY7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
LRIT3Q3SXY7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.29■■□□□ 1.8
LRIT3Q3SXY7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.29■■□□□ 1.8
LRIT3Q3SXY7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.29■■□□□ 1.8
LRIT3Q3SXY7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.29■■□□□ 1.8
LRIT3Q3SXY7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.28■■□□□ 1.8
LRIT3Q3SXY7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.28■■□□□ 1.8
LRIT3Q3SXY7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.28■■□□□ 1.8
LRIT3Q3SXY7 WHAMMP3-201ENST00000611636 1609 ntBASIC26.28■■□□□ 1.8
LRIT3Q3SXY7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LRIT3Q3SXY7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.27■■□□□ 1.8
LRIT3Q3SXY7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LRIT3Q3SXY7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.27■■□□□ 1.8
LRIT3Q3SXY7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LRIT3Q3SXY7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.26■■□□□ 1.79
LRIT3Q3SXY7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
LRIT3Q3SXY7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
LRIT3Q3SXY7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LRIT3Q3SXY7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LRIT3Q3SXY7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.26■■□□□ 1.79
LRIT3Q3SXY7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LRIT3Q3SXY7 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.26■■□□□ 1.79
LRIT3Q3SXY7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
LRIT3Q3SXY7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
LRIT3Q3SXY7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LRIT3Q3SXY7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.25■■□□□ 1.79
LRIT3Q3SXY7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LRIT3Q3SXY7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.25■■□□□ 1.79
LRIT3Q3SXY7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.25■■□□□ 1.79
LRIT3Q3SXY7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.25■■□□□ 1.79
LRIT3Q3SXY7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LRIT3Q3SXY7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LRIT3Q3SXY7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
LRIT3Q3SXY7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LRIT3Q3SXY7 AC097381.1-201ENST00000429019 1296 ntBASIC26.24■■□□□ 1.79
LRIT3Q3SXY7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRIT3Q3SXY7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.23■■□□□ 1.79
LRIT3Q3SXY7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRIT3Q3SXY7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LRIT3Q3SXY7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LRIT3Q3SXY7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.22■■□□□ 1.79
LRIT3Q3SXY7 AL162430.1-201ENST00000480705 870 ntBASIC26.22■■□□□ 1.79
LRIT3Q3SXY7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.22■■□□□ 1.79
LRIT3Q3SXY7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LRIT3Q3SXY7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LRIT3Q3SXY7 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.21■■□□□ 1.79
LRIT3Q3SXY7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.21■■□□□ 1.79
LRIT3Q3SXY7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
LRIT3Q3SXY7 EDA-201ENST00000338901 1233 ntBASIC26.2■■□□□ 1.78
LRIT3Q3SXY7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.2■■□□□ 1.78
LRIT3Q3SXY7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.2■■□□□ 1.78
LRIT3Q3SXY7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.2■■□□□ 1.78
LRIT3Q3SXY7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.2■■□□□ 1.78
LRIT3Q3SXY7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
LRIT3Q3SXY7 UNC93B3-201ENST00000308076 687 ntBASIC26.19■■□□□ 1.78
LRIT3Q3SXY7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LRIT3Q3SXY7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.19■■□□□ 1.78
LRIT3Q3SXY7 AC105265.2-201ENST00000467189 838 ntBASIC26.19■■□□□ 1.78
LRIT3Q3SXY7 MIR4281-201ENST00000580852 62 ntBASIC26.19■■□□□ 1.78
LRIT3Q3SXY7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
LRIT3Q3SXY7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
LRIT3Q3SXY7 AL355001.2-201ENST00000620617 1191 ntBASIC26.18■■□□□ 1.78
LRIT3Q3SXY7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.17■■□□□ 1.78
LRIT3Q3SXY7 AL136162.1-201ENST00000607711 1078 ntBASIC26.17■■□□□ 1.78
LRIT3Q3SXY7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
LRIT3Q3SXY7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.16■■□□□ 1.78
LRIT3Q3SXY7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
LRIT3Q3SXY7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.15■■□□□ 1.78
LRIT3Q3SXY7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LRIT3Q3SXY7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.14■■□□□ 1.78
LRIT3Q3SXY7 AC090192.1-201ENST00000517740 490 ntBASIC26.14■■□□□ 1.78
LRIT3Q3SXY7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.14■■□□□ 1.77
LRIT3Q3SXY7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
LRIT3Q3SXY7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.13■■□□□ 1.77
LRIT3Q3SXY7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
LRIT3Q3SXY7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.13■■□□□ 1.77
LRIT3Q3SXY7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
LRIT3Q3SXY7 AC087623.3-201ENST00000607047 1098 ntBASIC26.13■■□□□ 1.77
LRIT3Q3SXY7 RARRES2P11-201ENST00000635158 484 ntBASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms