Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNAI3Q3KNW1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
SNAI3Q3KNW1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.85■□□□□ 0.93
SNAI3Q3KNW1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
SNAI3Q3KNW1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.85■□□□□ 0.93
SNAI3Q3KNW1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNAI3Q3KNW1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNAI3Q3KNW1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
SNAI3Q3KNW1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SNAI3Q3KNW1 RP9P-202ENST00000450133 1212 ntBASIC20.84■□□□□ 0.93
SNAI3Q3KNW1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.84■□□□□ 0.93
SNAI3Q3KNW1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNAI3Q3KNW1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.84■□□□□ 0.93
SNAI3Q3KNW1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNAI3Q3KNW1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNAI3Q3KNW1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SNAI3Q3KNW1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SNAI3Q3KNW1 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.83■□□□□ 0.93
SNAI3Q3KNW1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.83■□□□□ 0.93
SNAI3Q3KNW1 AC007029.1-201ENST00000604183 313 ntBASIC20.83■□□□□ 0.93
SNAI3Q3KNW1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SNAI3Q3KNW1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNAI3Q3KNW1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNAI3Q3KNW1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNAI3Q3KNW1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNAI3Q3KNW1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.82■□□□□ 0.92
SNAI3Q3KNW1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.82■□□□□ 0.92
SNAI3Q3KNW1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.82■□□□□ 0.92
SNAI3Q3KNW1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SNAI3Q3KNW1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNAI3Q3KNW1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNAI3Q3KNW1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNAI3Q3KNW1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNAI3Q3KNW1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNAI3Q3KNW1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SNAI3Q3KNW1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNAI3Q3KNW1 AC093536.1-201ENST00000569153 554 ntBASIC20.81■□□□□ 0.92
SNAI3Q3KNW1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.81■□□□□ 0.92
SNAI3Q3KNW1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNAI3Q3KNW1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNAI3Q3KNW1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNAI3Q3KNW1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SNAI3Q3KNW1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNAI3Q3KNW1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.8■□□□□ 0.92
SNAI3Q3KNW1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNAI3Q3KNW1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNAI3Q3KNW1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.8■□□□□ 0.92
SNAI3Q3KNW1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNAI3Q3KNW1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SNAI3Q3KNW1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.8■□□□□ 0.92
SNAI3Q3KNW1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNAI3Q3KNW1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNAI3Q3KNW1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNAI3Q3KNW1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SNAI3Q3KNW1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNAI3Q3KNW1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
SNAI3Q3KNW1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.79■□□□□ 0.92
SNAI3Q3KNW1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SNAI3Q3KNW1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SNAI3Q3KNW1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNAI3Q3KNW1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SNAI3Q3KNW1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNAI3Q3KNW1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.77■□□□□ 0.92
SNAI3Q3KNW1 AC135731.1-201ENST00000569415 2548 ntBASIC20.77■□□□□ 0.92
SNAI3Q3KNW1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.77■□□□□ 0.92
SNAI3Q3KNW1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNAI3Q3KNW1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SNAI3Q3KNW1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNAI3Q3KNW1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.77■□□□□ 0.92
SNAI3Q3KNW1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNAI3Q3KNW1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNAI3Q3KNW1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNAI3Q3KNW1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.76■□□□□ 0.91
SNAI3Q3KNW1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNAI3Q3KNW1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SNAI3Q3KNW1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.76■□□□□ 0.91
SNAI3Q3KNW1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.76■□□□□ 0.91
SNAI3Q3KNW1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNAI3Q3KNW1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNAI3Q3KNW1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNAI3Q3KNW1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.75■□□□□ 0.91
SNAI3Q3KNW1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNAI3Q3KNW1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNAI3Q3KNW1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNAI3Q3KNW1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNAI3Q3KNW1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.75■□□□□ 0.91
SNAI3Q3KNW1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNAI3Q3KNW1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNAI3Q3KNW1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SNAI3Q3KNW1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SNAI3Q3KNW1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
SNAI3Q3KNW1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.74■□□□□ 0.91
SNAI3Q3KNW1 AC097639.1-201ENST00000565519 1891 ntBASIC20.74■□□□□ 0.91
SNAI3Q3KNW1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.74■□□□□ 0.91
SNAI3Q3KNW1 RNF126P1-201ENST00000567452 1320 ntBASIC20.74■□□□□ 0.91
SNAI3Q3KNW1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNAI3Q3KNW1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNAI3Q3KNW1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNAI3Q3KNW1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SNAI3Q3KNW1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms