Protein–RNA interactions for Protein: Q3C1V0

MS4A18, Membrane-spanning 4-domains subfamily A member 18, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A18Q3C1V0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A18Q3C1V0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A18Q3C1V0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MS4A18Q3C1V0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A18Q3C1V0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.53■■□□□ 1.04
MS4A18Q3C1V0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
MS4A18Q3C1V0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
MS4A18Q3C1V0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
MS4A18Q3C1V0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A18Q3C1V0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
MS4A18Q3C1V0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A18Q3C1V0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A18Q3C1V0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A18Q3C1V0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
MS4A18Q3C1V0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A18Q3C1V0 AC026202.3-201ENST00000600805 1127 ntBASIC21.52■■□□□ 1.04
MS4A18Q3C1V0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MS4A18Q3C1V0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.51■■□□□ 1.03
MS4A18Q3C1V0 RAP2CP1-202ENST00000605179 643 ntBASIC21.51■■□□□ 1.03
MS4A18Q3C1V0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
MS4A18Q3C1V0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
MS4A18Q3C1V0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
MS4A18Q3C1V0 HSD17B1P1-201ENST00000590052 955 ntBASIC21.5■■□□□ 1.03
MS4A18Q3C1V0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.5■■□□□ 1.03
MS4A18Q3C1V0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MS4A18Q3C1V0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
MS4A18Q3C1V0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MS4A18Q3C1V0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.49■■□□□ 1.03
MS4A18Q3C1V0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.49■■□□□ 1.03
MS4A18Q3C1V0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
MS4A18Q3C1V0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MS4A18Q3C1V0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MS4A18Q3C1V0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.49■■□□□ 1.03
MS4A18Q3C1V0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MS4A18Q3C1V0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MS4A18Q3C1V0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MS4A18Q3C1V0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MS4A18Q3C1V0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MS4A18Q3C1V0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MS4A18Q3C1V0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MS4A18Q3C1V0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MS4A18Q3C1V0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MS4A18Q3C1V0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MS4A18Q3C1V0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.46■■□□□ 1.03
MS4A18Q3C1V0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
MS4A18Q3C1V0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MS4A18Q3C1V0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
MS4A18Q3C1V0 AC009831.1-201ENST00000580420 1582 ntBASIC21.45■■□□□ 1.02
MS4A18Q3C1V0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
MS4A18Q3C1V0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MS4A18Q3C1V0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MS4A18Q3C1V0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
MS4A18Q3C1V0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
MS4A18Q3C1V0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
MS4A18Q3C1V0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MS4A18Q3C1V0 RARRES2P2-201ENST00000394842 485 ntBASIC21.44■■□□□ 1.02
MS4A18Q3C1V0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MS4A18Q3C1V0 AC133552.2-201ENST00000619106 1032 ntBASIC21.44■■□□□ 1.02
MS4A18Q3C1V0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.44■■□□□ 1.02
MS4A18Q3C1V0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.44■■□□□ 1.02
MS4A18Q3C1V0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
MS4A18Q3C1V0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.44■■□□□ 1.02
MS4A18Q3C1V0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MS4A18Q3C1V0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MS4A18Q3C1V0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MS4A18Q3C1V0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.43■■□□□ 1.02
MS4A18Q3C1V0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.43■■□□□ 1.02
MS4A18Q3C1V0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MS4A18Q3C1V0 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MS4A18Q3C1V0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.43■■□□□ 1.02
MS4A18Q3C1V0 AC097639.1-201ENST00000565519 1891 ntBASIC21.43■■□□□ 1.02
MS4A18Q3C1V0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
MS4A18Q3C1V0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
MS4A18Q3C1V0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
MS4A18Q3C1V0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MS4A18Q3C1V0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
MS4A18Q3C1V0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.42■■□□□ 1.02
MS4A18Q3C1V0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.42■■□□□ 1.02
MS4A18Q3C1V0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MS4A18Q3C1V0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MS4A18Q3C1V0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MS4A18Q3C1V0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MS4A18Q3C1V0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MS4A18Q3C1V0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
MS4A18Q3C1V0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
MS4A18Q3C1V0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MS4A18Q3C1V0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.41■■□□□ 1.02
MS4A18Q3C1V0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
MS4A18Q3C1V0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.4■■□□□ 1.02
MS4A18Q3C1V0 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.4■■□□□ 1.02
MS4A18Q3C1V0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.4■■□□□ 1.02
MS4A18Q3C1V0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MS4A18Q3C1V0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MS4A18Q3C1V0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MS4A18Q3C1V0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
MS4A18Q3C1V0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.39■■□□□ 1.02
MS4A18Q3C1V0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
MS4A18Q3C1V0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.39■■□□□ 1.01
MS4A18Q3C1V0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
MS4A18Q3C1V0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms