Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RSPO4Q2I0M5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.72■■□□□ 1.39
RSPO4Q2I0M5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RSPO4Q2I0M5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RSPO4Q2I0M5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.71■■□□□ 1.39
RSPO4Q2I0M5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.71■■□□□ 1.39
RSPO4Q2I0M5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.71■■□□□ 1.39
RSPO4Q2I0M5 AC120024.1-201ENST00000562672 995 ntBASIC23.71■■□□□ 1.39
RSPO4Q2I0M5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.71■■□□□ 1.39
RSPO4Q2I0M5 MTDHP2-201ENST00000601468 714 ntBASIC23.71■■□□□ 1.39
RSPO4Q2I0M5 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
RSPO4Q2I0M5 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RSPO4Q2I0M5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
RSPO4Q2I0M5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
RSPO4Q2I0M5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.7■■□□□ 1.38
RSPO4Q2I0M5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RSPO4Q2I0M5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.69■■□□□ 1.38
RSPO4Q2I0M5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RSPO4Q2I0M5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.69■■□□□ 1.38
RSPO4Q2I0M5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.69■■□□□ 1.38
RSPO4Q2I0M5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
RSPO4Q2I0M5 AL512631.2-201ENST00000604634 923 ntBASIC23.69■■□□□ 1.38
RSPO4Q2I0M5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RSPO4Q2I0M5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RSPO4Q2I0M5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RSPO4Q2I0M5 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.68■■□□□ 1.38
RSPO4Q2I0M5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RSPO4Q2I0M5 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.68■■□□□ 1.38
RSPO4Q2I0M5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RSPO4Q2I0M5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
RSPO4Q2I0M5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RSPO4Q2I0M5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.67■■□□□ 1.38
RSPO4Q2I0M5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.67■■□□□ 1.38
RSPO4Q2I0M5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RSPO4Q2I0M5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RSPO4Q2I0M5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.66■■□□□ 1.38
RSPO4Q2I0M5 SUDS3P1-201ENST00000505831 966 ntBASIC23.66■■□□□ 1.38
RSPO4Q2I0M5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RSPO4Q2I0M5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RSPO4Q2I0M5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RSPO4Q2I0M5 AP004833.2-201ENST00000532228 1454 ntBASIC23.65■■□□□ 1.38
RSPO4Q2I0M5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.65■■□□□ 1.38
RSPO4Q2I0M5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RSPO4Q2I0M5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.65■■□□□ 1.38
RSPO4Q2I0M5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.64■■□□□ 1.38
RSPO4Q2I0M5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.64■■□□□ 1.38
RSPO4Q2I0M5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RSPO4Q2I0M5 AL031432.3-201ENST00000607698 485 ntBASIC23.64■■□□□ 1.37
RSPO4Q2I0M5 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RSPO4Q2I0M5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
RSPO4Q2I0M5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RSPO4Q2I0M5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
RSPO4Q2I0M5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
RSPO4Q2I0M5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RSPO4Q2I0M5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.63■■□□□ 1.37
RSPO4Q2I0M5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.63■■□□□ 1.37
RSPO4Q2I0M5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RSPO4Q2I0M5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.62■■□□□ 1.37
RSPO4Q2I0M5 MIR6821-201ENST00000617625 74 ntBASIC23.62■■□□□ 1.37
RSPO4Q2I0M5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.62■■□□□ 1.37
RSPO4Q2I0M5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.62■■□□□ 1.37
RSPO4Q2I0M5 WHAMMP3-201ENST00000611636 1609 ntBASIC23.62■■□□□ 1.37
RSPO4Q2I0M5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.61■■□□□ 1.37
RSPO4Q2I0M5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RSPO4Q2I0M5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RSPO4Q2I0M5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RSPO4Q2I0M5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RSPO4Q2I0M5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.61■■□□□ 1.37
RSPO4Q2I0M5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.61■■□□□ 1.37
RSPO4Q2I0M5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.61■■□□□ 1.37
RSPO4Q2I0M5 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
RSPO4Q2I0M5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RSPO4Q2I0M5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RSPO4Q2I0M5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.6■■□□□ 1.37
RSPO4Q2I0M5 AL162430.1-201ENST00000480705 870 ntBASIC23.6■■□□□ 1.37
RSPO4Q2I0M5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.6■■□□□ 1.37
RSPO4Q2I0M5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.6■■□□□ 1.37
RSPO4Q2I0M5 UNC93B3-201ENST00000308076 687 ntBASIC23.59■■□□□ 1.37
RSPO4Q2I0M5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.59■■□□□ 1.37
RSPO4Q2I0M5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
RSPO4Q2I0M5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.59■■□□□ 1.37
RSPO4Q2I0M5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RSPO4Q2I0M5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.37
RSPO4Q2I0M5 AC105265.2-201ENST00000467189 838 ntBASIC23.58■■□□□ 1.37
RSPO4Q2I0M5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
RSPO4Q2I0M5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.57■■□□□ 1.36
RSPO4Q2I0M5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RSPO4Q2I0M5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RSPO4Q2I0M5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.57■■□□□ 1.36
RSPO4Q2I0M5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RSPO4Q2I0M5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.56■■□□□ 1.36
RSPO4Q2I0M5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.56■■□□□ 1.36
RSPO4Q2I0M5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RSPO4Q2I0M5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.56■■□□□ 1.36
RSPO4Q2I0M5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.56■■□□□ 1.36
RSPO4Q2I0M5 AL136162.1-201ENST00000607711 1078 ntBASIC23.56■■□□□ 1.36
RSPO4Q2I0M5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.56■■□□□ 1.36
RSPO4Q2I0M5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RSPO4Q2I0M5 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.56■■□□□ 1.36
RSPO4Q2I0M5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms