Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPCS3P61009 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPCS3P61009 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPCS3P61009 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPCS3P61009 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPCS3P61009 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPCS3P61009 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.37■□□□□ 0.69
SPCS3P61009 AC096887.2-201ENST00000623443 1957 ntBASIC19.37■□□□□ 0.69
SPCS3P61009 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPCS3P61009 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.36■□□□□ 0.69
SPCS3P61009 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.36■□□□□ 0.69
SPCS3P61009 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPCS3P61009 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SPCS3P61009 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPCS3P61009 AC138932.3-201ENST00000567634 1902 ntBASIC19.35■□□□□ 0.69
SPCS3P61009 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SPCS3P61009 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SPCS3P61009 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPCS3P61009 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPCS3P61009 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPCS3P61009 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.34■□□□□ 0.69
SPCS3P61009 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPCS3P61009 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPCS3P61009 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPCS3P61009 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPCS3P61009 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPCS3P61009 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SPCS3P61009 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPCS3P61009 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPCS3P61009 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPCS3P61009 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPCS3P61009 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPCS3P61009 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPCS3P61009 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPCS3P61009 AL359258.2-201ENST00000564063 1566 ntBASIC19.32■□□□□ 0.68
SPCS3P61009 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.32■□□□□ 0.68
SPCS3P61009 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.32■□□□□ 0.68
SPCS3P61009 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPCS3P61009 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.31■□□□□ 0.68
SPCS3P61009 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPCS3P61009 AL139125.2-201ENST00000623134 1869 ntBASIC19.31■□□□□ 0.68
SPCS3P61009 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPCS3P61009 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPCS3P61009 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.31■□□□□ 0.68
SPCS3P61009 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPCS3P61009 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPCS3P61009 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.31■□□□□ 0.68
SPCS3P61009 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPCS3P61009 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPCS3P61009 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SPCS3P61009 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPCS3P61009 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.3■□□□□ 0.68
SPCS3P61009 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SPCS3P61009 AL359504.2-201ENST00000605506 1601 ntBASIC19.3■□□□□ 0.68
SPCS3P61009 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.3■□□□□ 0.68
SPCS3P61009 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.3■□□□□ 0.68
SPCS3P61009 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.3■□□□□ 0.68
SPCS3P61009 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.3■□□□□ 0.68
SPCS3P61009 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPCS3P61009 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SPCS3P61009 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPCS3P61009 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPCS3P61009 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.29■□□□□ 0.68
SPCS3P61009 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPCS3P61009 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPCS3P61009 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SPCS3P61009 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPCS3P61009 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.29■□□□□ 0.68
SPCS3P61009 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPCS3P61009 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.28■□□□□ 0.68
SPCS3P61009 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPCS3P61009 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.28■□□□□ 0.68
SPCS3P61009 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPCS3P61009 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPCS3P61009 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SPCS3P61009 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPCS3P61009 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPCS3P61009 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SPCS3P61009 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPCS3P61009 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPCS3P61009 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.27■□□□□ 0.68
SPCS3P61009 DUX4L11-201ENST00000611504 1267 ntBASIC19.27■□□□□ 0.68
SPCS3P61009 DUX4L12-201ENST00000614593 1267 ntBASIC19.27■□□□□ 0.68
SPCS3P61009 DUX4L14-201ENST00000621227 1267 ntBASIC19.27■□□□□ 0.68
SPCS3P61009 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SPCS3P61009 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.27■□□□□ 0.68
SPCS3P61009 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SPCS3P61009 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms