Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 SUF20tG(GCC)F1 71 nt6.85□□□□□ -1.31
SUB1P54000 tG(GCC)F2tG(GCC)F2 71 nt6.85□□□□□ -1.31
SUB1P54000 tG(GCC)G1tG(GCC)G1 71 nt6.85□□□□□ -1.31
SUB1P54000 tG(GCC)G2tG(GCC)G2 71 nt6.85□□□□□ -1.31
SUB1P54000 tG(GCC)J1tG(GCC)J1 71 nt6.85□□□□□ -1.31
SUB1P54000 SUF23tG(GCC)J2 71 nt6.85□□□□□ -1.31
SUB1P54000 tG(GCC)MtG(GCC)M 71 nt6.85□□□□□ -1.31
SUB1P54000 tG(GCC)O1tG(GCC)O1 71 nt6.85□□□□□ -1.31
SUB1P54000 SUF17tG(GCC)O2 71 nt6.85□□□□□ -1.31
SUB1P54000 tG(GCC)P1tG(GCC)P1 71 nt6.85□□□□□ -1.31
SUB1P54000 tG(GCC)P2tG(GCC)P2 71 nt6.85□□□□□ -1.31
SUB1P54000 TAF11YML015C 1041 nt6.85□□□□□ -1.31
SUB1P54000 SPG5YMR191W 1122 nt6.85□□□□□ -1.31
SUB1P54000 GTO3YMR251W 1101 nt6.85□□□□□ -1.31
SUB1P54000 RFA2YNL312W 822 nt6.85□□□□□ -1.31
SUB1P54000 GCR2YNL199C 1605 nt6.85□□□□□ -1.31
SUB1P54000 DBF2YGR092W 1719 nt6.84□□□□□ -1.31
SUB1P54000 GLE1YDL207W 1617 nt6.84□□□□□ -1.31
SUB1P54000 SUF5tG(CCC)O 72 nt6.84□□□□□ -1.31
SUB1P54000 RRT7YLL030C 342 nt6.84□□□□□ -1.31
SUB1P54000 ISC1YER019W 1434 nt6.84□□□□□ -1.32
SUB1P54000 CLB4YLR210W 1383 nt6.83□□□□□ -1.32
SUB1P54000 YPQ2YDR352W 954 nt6.83□□□□□ -1.32
SUB1P54000 YSC83YHR017W 1158 nt6.83□□□□□ -1.32
SUB1P54000 YNL067W-AYNL067W-A 147 nt6.83□□□□□ -1.32
SUB1P54000 SCT1YBL011W 2280 nt6.83□□□□□ -1.32
SUB1P54000 ECM3YOR092W 1842 nt6.83□□□□□ -1.32
SUB1P54000 MRP1YDR347W 966 nt6.82□□□□□ -1.32
SUB1P54000 YFR052C-AYFR052C-A 306 nt6.82□□□□□ -1.32
SUB1P54000 SPG1YGR236C 288 nt6.82□□□□□ -1.32
SUB1P54000 ICS3YJL077C 396 nt6.82□□□□□ -1.32
SUB1P54000 PEX13YLR191W 1161 nt6.82□□□□□ -1.32
SUB1P54000 NTG2YOL043C 1143 nt6.82□□□□□ -1.32
SUB1P54000 YPR130CYPR130C 408 nt6.82□□□□□ -1.32
SUB1P54000 GPB2YAL056W 2643 nt6.81□□□□□ -1.32
SUB1P54000 PYK2YOR347C 1521 nt6.81□□□□□ -1.32
SUB1P54000 TUB1YML085C 1344 nt6.81□□□□□ -1.32
SUB1P54000 ATR1YML116W 1629 nt6.81□□□□□ -1.32
SUB1P54000 PTC7YHR076W 1032 nt6.81□□□□□ -1.32
SUB1P54000 FBA1YKL060C 1080 nt6.81□□□□□ -1.32
SUB1P54000 SLD2YKL108W 1362 nt6.81□□□□□ -1.32
SUB1P54000 YMR034CYMR034C 1305 nt6.8□□□□□ -1.32
SUB1P54000 STT3YGL022W 2157 nt6.8□□□□□ -1.32
SUB1P54000 RPT1YKL145W 1404 nt6.8□□□□□ -1.32
SUB1P54000 MAC1YMR021C 1254 nt6.8□□□□□ -1.32
SUB1P54000 GET4YOR164C 939 nt6.8□□□□□ -1.32
SUB1P54000 VPS1YKR001C 2115 nt6.8□□□□□ -1.32
SUB1P54000 SKI2YLR398C 3864 nt6.79□□□□□ -1.32
SUB1P54000 CRF1YDR223W 1404 nt6.79□□□□□ -1.32
SUB1P54000 UTR2YEL040W 1404 nt6.79□□□□□ -1.32
SUB1P54000 MRPS28YDR337W 861 nt6.79□□□□□ -1.32
SUB1P54000 YHR020WYHR020W 2067 nt6.79□□□□□ -1.32
SUB1P54000 STE12YHR084W 2067 nt6.78□□□□□ -1.32
SUB1P54000 MEC3YLR288C 1425 nt6.78□□□□□ -1.32
SUB1P54000 YMR279CYMR279C 1623 nt6.78□□□□□ -1.32
SUB1P54000 BZZ1YHR114W 1902 nt6.78□□□□□ -1.32
SUB1P54000 RPN5YDL147W 1338 nt6.77□□□□□ -1.32
SUB1P54000 YNR005CYNR005C 405 nt6.77□□□□□ -1.33
SUB1P54000 YBR113WYBR113W 483 nt6.77□□□□□ -1.33
SUB1P54000 CCC2YDR270W 3015 nt6.77□□□□□ -1.33
SUB1P54000 EDE1YBL047C 4146 nt6.77□□□□□ -1.33
SUB1P54000 PMA1YGL008C 2757 nt6.77□□□□□ -1.33
SUB1P54000 YPK2YMR104C 2034 nt6.76□□□□□ -1.33
SUB1P54000 tL(UAA)B1tL(UAA)B1 84 nt6.76□□□□□ -1.33
SUB1P54000 tL(UAA)B2tL(UAA)B2 84 nt6.76□□□□□ -1.33
SUB1P54000 tL(UAA)DtL(UAA)D 84 nt6.76□□□□□ -1.33
SUB1P54000 SUP51tL(UAA)J 84 nt6.76□□□□□ -1.33
SUB1P54000 tL(UAA)KtL(UAA)K 84 nt6.76□□□□□ -1.33
SUB1P54000 tL(UAA)LtL(UAA)L 84 nt6.76□□□□□ -1.33
SUB1P54000 tL(UAA)NtL(UAA)N 84 nt6.76□□□□□ -1.33
SUB1P54000 CIS3YJL158C 684 nt6.76□□□□□ -1.33
SUB1P54000 THI2YBR240C 1353 nt6.76□□□□□ -1.33
SUB1P54000 RAP1YNL216W 2484 nt6.76□□□□□ -1.33
SUB1P54000 PIF1YML061C 2580 nt6.76□□□□□ -1.33
SUB1P54000 YME1YPR024W 2244 nt6.76□□□□□ -1.33
SUB1P54000 ARB1YER036C 1833 nt6.76□□□□□ -1.33
SUB1P54000 PPM2YOL141W 2088 nt6.75□□□□□ -1.33
SUB1P54000 RIO1YOR119C 1455 nt6.75□□□□□ -1.33
SUB1P54000 YAL016C-AYAL016C-A 315 nt6.75□□□□□ -1.33
SUB1P54000 ECM1YAL059W 639 nt6.75□□□□□ -1.33
SUB1P54000 TOM40YMR203W 1164 nt6.75□□□□□ -1.33
SUB1P54000 IMA5YJL216C 1746 nt6.74□□□□□ -1.33
SUB1P54000 CIA1YDR267C 993 nt6.74□□□□□ -1.33
SUB1P54000 RPP1YHR062C 882 nt6.74□□□□□ -1.33
SUB1P54000 HSP150YJL159W 1242 nt6.74□□□□□ -1.33
SUB1P54000 ATG36YJL185C 882 nt6.74□□□□□ -1.33
SUB1P54000 GCV3YAL044C 513 nt6.74□□□□□ -1.33
SUB1P54000 RHO4YKR055W 876 nt6.74□□□□□ -1.33
SUB1P54000 OSW5YMR148W 447 nt6.74□□□□□ -1.33
SUB1P54000 CAR1YPL111W 1002 nt6.74□□□□□ -1.33
SUB1P54000 CSC1YLR241W 2349 nt6.74□□□□□ -1.33
SUB1P54000 ARN2YHL047C 1863 nt6.74□□□□□ -1.33
SUB1P54000 SIS2YKR072C 1689 nt6.74□□□□□ -1.33
SUB1P54000 MRE11YMR224C 2079 nt6.73□□□□□ -1.33
SUB1P54000 KCH1YJR054W 1494 nt6.73□□□□□ -1.33
SUB1P54000 PDA1YER178W 1263 nt6.73□□□□□ -1.33
SUB1P54000 RPT6YGL048C 1218 nt6.73□□□□□ -1.33
SUB1P54000 SQT1YIR012W 1296 nt6.73□□□□□ -1.33
SUB1P54000 MIA40YKL195W 1212 nt6.73□□□□□ -1.33
SUB1P54000 SEC62YPL094C 825 nt6.73□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 75.2 ms