Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 YDL218WYDL218W 954 nt7.09□□□□□ -1.27
HDA1P53973 IES2YNL215W 963 nt7.09□□□□□ -1.27
HDA1P53973 SVF1YDR346C 1446 nt7.09□□□□□ -1.28
HDA1P53973 YNL040WYNL040W 1371 nt7.08□□□□□ -1.28
HDA1P53973 YDR015CYDR015C 240 nt7.08□□□□□ -1.28
HDA1P53973 MPC1YGL080W 393 nt7.08□□□□□ -1.28
HDA1P53973 RIX7YLL034C 2514 nt7.08□□□□□ -1.28
HDA1P53973 DAL7YIR031C 1665 nt7.07□□□□□ -1.28
HDA1P53973 ELP3YPL086C 1674 nt7.07□□□□□ -1.28
HDA1P53973 YMR306C-AYMR306C-A 390 nt7.07□□□□□ -1.28
HDA1P53973 UIP4YPL186C 915 nt7.07□□□□□ -1.28
HDA1P53973 YCK1YHR135C 1617 nt7.07□□□□□ -1.28
HDA1P53973 EMP65YER140W 1671 nt7.06□□□□□ -1.28
HDA1P53973 DPB2YPR175W 2070 nt7.06□□□□□ -1.28
HDA1P53973 COA1YIL157C 594 nt7.06□□□□□ -1.28
HDA1P53973 RPS5YJR123W 678 nt7.06□□□□□ -1.28
HDA1P53973 PGM1YKL127W 1713 nt7.06□□□□□ -1.28
HDA1P53973 TKL2YBR117C 2046 nt7.06□□□□□ -1.28
HDA1P53973 ICL1YER065C 1674 nt7.06□□□□□ -1.28
HDA1P53973 MDM31YHR194W 1740 nt7.05□□□□□ -1.28
HDA1P53973 TRP1YDR007W 675 nt7.05□□□□□ -1.28
HDA1P53973 BIM1YER016W 1035 nt7.05□□□□□ -1.28
HDA1P53973 RAI1YGL246C 1164 nt7.05□□□□□ -1.28
HDA1P53973 BUD32YGR262C 786 nt7.05□□□□□ -1.28
HDA1P53973 LSM12YHR121W 564 nt7.05□□□□□ -1.28
HDA1P53973 ECM19YLR390W 339 nt7.05□□□□□ -1.28
HDA1P53973 YOL079WYOL079W 399 nt7.05□□□□□ -1.28
HDA1P53973 CDC34YDR054C 888 nt7.04□□□□□ -1.28
HDA1P53973 ERP5YHR110W 639 nt7.04□□□□□ -1.28
HDA1P53973 YMC1YPR058W 924 nt7.04□□□□□ -1.28
HDA1P53973 MRPL36YBR122C 534 nt7.04□□□□□ -1.28
HDA1P53973 GPA2YER020W 1350 nt7.04□□□□□ -1.28
HDA1P53973 PRY3YJL078C 2646 nt7.04□□□□□ -1.28
HDA1P53973 CIR2YOR356W 1896 nt7.03□□□□□ -1.28
HDA1P53973 TRR1YDR353W 960 nt7.03□□□□□ -1.28
HDA1P53973 YIR017W-AYIR017W-A 600 nt7.03□□□□□ -1.28
HDA1P53973 PEX12YMR026C 1200 nt7.03□□□□□ -1.28
HDA1P53973 CDC16YKL022C 2523 nt7.03□□□□□ -1.28
HDA1P53973 CRP1YHR146W 1398 nt7.03□□□□□ -1.28
HDA1P53973 YIL108WYIL108W 2091 nt7.02□□□□□ -1.29
HDA1P53973 SUR7YML052W 909 nt7.02□□□□□ -1.29
HDA1P53973 RRN10YBL025W 438 nt7.02□□□□□ -1.29
HDA1P53973 YCR061WYCR061W 1896 nt7.01□□□□□ -1.29
HDA1P53973 MNS1YJR131W 1650 nt7.01□□□□□ -1.29
HDA1P53973 ARP3YJR065C 1350 nt7.01□□□□□ -1.29
HDA1P53973 POP5YAL033W 522 nt7.01□□□□□ -1.29
HDA1P53973 YMR119W-AYMR119W-A 375 nt7.01□□□□□ -1.29
HDA1P53973 CAF40YNL288W 1122 nt7.01□□□□□ -1.29
HDA1P53973 RRS1YOR294W 612 nt7.01□□□□□ -1.29
HDA1P53973 YOR300WYOR300W 309 nt7.01□□□□□ -1.29
HDA1P53973 EXG1YLR300W 1347 nt7.01□□□□□ -1.29
HDA1P53973 DAP1YPL170W 459 nt7□□□□□ -1.29
HDA1P53973 UTP4YDR324C 2331 nt7□□□□□ -1.29
HDA1P53973 GCV3YAL044C 513 nt6.99□□□□□ -1.29
HDA1P53973 BSC4YNL269W 396 nt6.99□□□□□ -1.29
HDA1P53973 NDJ1YOL104C 1059 nt6.99□□□□□ -1.29
HDA1P53973 RPL21AYBR191W 483 nt6.99□□□□□ -1.29
HDA1P53973 YBR138CYBR138C 1575 nt6.99□□□□□ -1.29
HDA1P53973 DIT1YDR403W 1611 nt6.98□□□□□ -1.29
HDA1P53973 ARO10YDR380W 1908 nt6.98□□□□□ -1.29
HDA1P53973 YDR278CYDR278C 318 nt6.98□□□□□ -1.29
HDA1P53973 SUA5YGL169W 1281 nt6.98□□□□□ -1.29
HDA1P53973 MAD2YJL030W 591 nt6.98□□□□□ -1.29
HDA1P53973 RSA3YLR221C 663 nt6.98□□□□□ -1.29
HDA1P53973 SKS1YPL026C 1509 nt6.97□□□□□ -1.29
HDA1P53973 SIT4YDL047W 936 nt6.97□□□□□ -1.29
HDA1P53973 YDL144CYDL144C 1071 nt6.97□□□□□ -1.29
HDA1P53973 TIM22YDL217C 624 nt6.97□□□□□ -1.29
HDA1P53973 YDR401WYDR401W 564 nt6.97□□□□□ -1.29
HDA1P53973 YMR114CYMR114C 1107 nt6.97□□□□□ -1.29
HDA1P53973 YNL017CYNL017C 339 nt6.97□□□□□ -1.29
HDA1P53973 MSB3YNL293W 1902 nt6.97□□□□□ -1.29
HDA1P53973 WHI2YOR043W 1461 nt6.97□□□□□ -1.29
HDA1P53973 ENP1YBR247C 1452 nt6.97□□□□□ -1.29
HDA1P53973 HXT13YEL069C 1695 nt6.96□□□□□ -1.29
HDA1P53973 SHO1YER118C 1104 nt6.96□□□□□ -1.3
HDA1P53973 PHB1YGR132C 864 nt6.96□□□□□ -1.3
HDA1P53973 TIF2YJL138C 1188 nt6.96□□□□□ -1.3
HDA1P53973 TIF1YKR059W 1188 nt6.96□□□□□ -1.3
HDA1P53973 GUD1YDL238C 1470 nt6.96□□□□□ -1.3
HDA1P53973 YCR099CYCR099C 468 nt6.95□□□□□ -1.3
HDA1P53973 YDR034W-BYDR034W-B 156 nt6.95□□□□□ -1.3
HDA1P53973 VPS61YDR136C 573 nt6.95□□□□□ -1.3
HDA1P53973 tR(ACG)DtR(ACG)D 73 nt6.95□□□□□ -1.3
HDA1P53973 tR(ACG)EtR(ACG)E 73 nt6.95□□□□□ -1.3
HDA1P53973 tR(ACG)KtR(ACG)K 73 nt6.95□□□□□ -1.3
HDA1P53973 tR(ACG)LtR(ACG)L 73 nt6.95□□□□□ -1.3
HDA1P53973 tR(ACG)OtR(ACG)O 73 nt6.95□□□□□ -1.3
HDA1P53973 YHR070C-AYHR070C-A 411 nt6.95□□□□□ -1.3
HDA1P53973 CTF8YHR191C 402 nt6.95□□□□□ -1.3
HDA1P53973 YNL042W-BYNL042W-B 258 nt6.95□□□□□ -1.3
HDA1P53973 ENV7YPL236C 1095 nt6.95□□□□□ -1.3
HDA1P53973 BUD9YGR041W 1644 nt6.94□□□□□ -1.3
HDA1P53973 COX20YDR231C 618 nt6.94□□□□□ -1.3
HDA1P53973 Q0144Q0144 330 nt6.94□□□□□ -1.3
HDA1P53973 LDS1YAL018C 978 nt6.94□□□□□ -1.3
HDA1P53973 PEX13YLR191W 1161 nt6.94□□□□□ -1.3
HDA1P53973 YPR160C-AYPR160C-A 285 nt6.94□□□□□ -1.3
HDA1P53973 YBR226CYBR226C 411 nt6.94□□□□□ -1.3
HDA1P53973 NHA1YLR138W 2958 nt6.94□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms