Protein–RNA interactions for Protein: P53882

TDA7, Topoisomerase I damage affected protein 7, yeastyeast

Predicted RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA7P53882 PUF3YLL013C 2640 nt5.91□□□□□ -1.46
TDA7P53882 TMT1YER175C 900 nt5.91□□□□□ -1.46
TDA7P53882 DAP1YPL170W 459 nt5.91□□□□□ -1.46
TDA7P53882 GPH1YPR160W 2709 nt5.91□□□□□ -1.46
TDA7P53882 NPL6YMR091C 1308 nt5.91□□□□□ -1.46
TDA7P53882 MSB3YNL293W 1902 nt5.91□□□□□ -1.46
TDA7P53882 UTR2YEL040W 1404 nt5.91□□□□□ -1.46
TDA7P53882 BRL1YHR036W 1416 nt5.91□□□□□ -1.46
TDA7P53882 ECM27YJR106W 2178 nt5.9□□□□□ -1.46
TDA7P53882 GPB2YAL056W 2643 nt5.9□□□□□ -1.46
TDA7P53882 YEL068CYEL068C 333 nt5.9□□□□□ -1.46
TDA7P53882 CBP4YGR174C 513 nt5.9□□□□□ -1.46
TDA7P53882 SUF5tG(CCC)O 72 nt5.89□□□□□ -1.47
TDA7P53882 MRPL22YNL177C 930 nt5.89□□□□□ -1.47
TDA7P53882 YNR075C-AYNR075C-A 93 nt5.89□□□□□ -1.47
TDA7P53882 SGV1YPR161C 1974 nt5.89□□□□□ -1.47
TDA7P53882 AFG1YEL052W 1530 nt5.89□□□□□ -1.47
TDA7P53882 YCK1YHR135C 1617 nt5.88□□□□□ -1.47
TDA7P53882 WHI2YOR043W 1461 nt5.88□□□□□ -1.47
TDA7P53882 RAD24YER173W 1980 nt5.87□□□□□ -1.47
TDA7P53882 GTT3YEL017W 1014 nt5.87□□□□□ -1.47
TDA7P53882 YPR114WYPR114W 948 nt5.87□□□□□ -1.47
TDA7P53882 AQR1YNL065W 1761 nt5.87□□□□□ -1.47
TDA7P53882 SNU71YGR013W 1863 nt5.86□□□□□ -1.47
TDA7P53882 HXT13YEL069C 1695 nt5.86□□□□□ -1.47
TDA7P53882 HEL1YKR017C 1656 nt5.86□□□□□ -1.47
TDA7P53882 CMK2YOL016C 1344 nt5.86□□□□□ -1.47
TDA7P53882 MDH3YDL078C 1032 nt5.86□□□□□ -1.47
TDA7P53882 RGT2YDL138W 2292 nt5.86□□□□□ -1.47
TDA7P53882 SMC5YOL034W 3282 nt5.86□□□□□ -1.47
TDA7P53882 YTP1YNL237W 1380 nt5.85□□□□□ -1.47
TDA7P53882 MRP17YKL003C 396 nt5.85□□□□□ -1.47
TDA7P53882 CCP1YKR066C 1086 nt5.85□□□□□ -1.47
TDA7P53882 AIM33YML087C 939 nt5.85□□□□□ -1.47
TDA7P53882 YCR061WYCR061W 1896 nt5.84□□□□□ -1.47
TDA7P53882 ADY2YCR010C 852 nt5.84□□□□□ -1.47
TDA7P53882 UBC11YOR339C 471 nt5.84□□□□□ -1.47
TDA7P53882 NTE1YML059C 5040 nt5.84□□□□□ -1.48
TDA7P53882 IME2YJL106W 1938 nt5.84□□□□□ -1.48
TDA7P53882 CDC13YDL220C 2775 nt5.83□□□□□ -1.48
TDA7P53882 YGR022CYGR022C 330 nt5.83□□□□□ -1.48
TDA7P53882 PHB1YGR132C 864 nt5.83□□□□□ -1.48
TDA7P53882 BCY1YIL033C 1251 nt5.83□□□□□ -1.48
TDA7P53882 OPI8YKR035C 642 nt5.83□□□□□ -1.48
TDA7P53882 YGL235WYGL235W 537 nt5.82□□□□□ -1.48
TDA7P53882 YHR070C-AYHR070C-A 411 nt5.82□□□□□ -1.48
TDA7P53882 YMR119W-AYMR119W-A 375 nt5.82□□□□□ -1.48
TDA7P53882 YOR300WYOR300W 309 nt5.82□□□□□ -1.48
TDA7P53882 RPL21AYBR191W 483 nt5.82□□□□□ -1.48
TDA7P53882 UBP13YBL067C 2244 nt5.81□□□□□ -1.48
TDA7P53882 TRR1YDR353W 960 nt5.81□□□□□ -1.48
TDA7P53882 YHR145CYHR145C 357 nt5.81□□□□□ -1.48
TDA7P53882 YIR042CYIR042C 711 nt5.81□□□□□ -1.48
TDA7P53882 CIT3YPR001W 1461 nt5.81□□□□□ -1.48
TDA7P53882 SES1YDR023W 1389 nt5.8□□□□□ -1.48
TDA7P53882 KIN1YDR122W 3195 nt5.8□□□□□ -1.48
TDA7P53882 SRF1YDL133W 1314 nt5.8□□□□□ -1.48
TDA7P53882 ATG4YNL223W 1485 nt5.8□□□□□ -1.48
TDA7P53882 YGR068W-AYGR068W-A 96 nt5.8□□□□□ -1.48
TDA7P53882 EFM4YIL064W 774 nt5.8□□□□□ -1.48
TDA7P53882 DAL3YIR032C 588 nt5.8□□□□□ -1.48
TDA7P53882 COX5AYNL052W 462 nt5.8□□□□□ -1.48
TDA7P53882 ATO2YNR002C 849 nt5.8□□□□□ -1.48
TDA7P53882 ARG1YOL058W 1263 nt5.8□□□□□ -1.48
TDA7P53882 YNL040WYNL040W 1371 nt5.8□□□□□ -1.48
TDA7P53882 ARP2YDL029W 1176 nt5.79□□□□□ -1.48
TDA7P53882 GAT4YIR013C 366 nt5.79□□□□□ -1.48
TDA7P53882 GLN1YPR035W 1113 nt5.79□□□□□ -1.48
TDA7P53882 YML133CYML133C 4125 nt5.79□□□□□ -1.48
TDA7P53882 EFM1YHL039W 1758 nt5.78□□□□□ -1.48
TDA7P53882 SEC23YPR181C 2307 nt5.77□□□□□ -1.49
TDA7P53882 GUD1YDL238C 1470 nt5.77□□□□□ -1.49
TDA7P53882 YCR047W-AYCR047W-A 207 nt5.77□□□□□ -1.49
TDA7P53882 ORM1YGR038W 669 nt5.77□□□□□ -1.49
TDA7P53882 tR(ACG)DtR(ACG)D 73 nt5.77□□□□□ -1.49
TDA7P53882 tR(ACG)EtR(ACG)E 73 nt5.77□□□□□ -1.49
TDA7P53882 tR(ACG)KtR(ACG)K 73 nt5.77□□□□□ -1.49
TDA7P53882 tR(ACG)LtR(ACG)L 73 nt5.77□□□□□ -1.49
TDA7P53882 tR(ACG)OtR(ACG)O 73 nt5.77□□□□□ -1.49
TDA7P53882 BSC4YNL269W 396 nt5.77□□□□□ -1.49
TDA7P53882 CNE1YAL058W 1509 nt5.77□□□□□ -1.49
TDA7P53882 PGM1YKL127W 1713 nt5.77□□□□□ -1.49
TDA7P53882 PYC2YBR218C 3543 nt5.76□□□□□ -1.49
TDA7P53882 RRP4YHR069C 1080 nt5.76□□□□□ -1.49
TDA7P53882 PAN6YIL145C 930 nt5.76□□□□□ -1.49
TDA7P53882 YHC3YJL059W 1227 nt5.76□□□□□ -1.49
TDA7P53882 LDB18YLL049W 540 nt5.76□□□□□ -1.49
TDA7P53882 DCN1YLR128W 810 nt5.76□□□□□ -1.49
TDA7P53882 PNP1YLR209C 936 nt5.76□□□□□ -1.49
TDA7P53882 HMT1YBR034C 1047 nt5.76□□□□□ -1.49
TDA7P53882 YBR144CYBR144C 315 nt5.76□□□□□ -1.49
TDA7P53882 QCR6YFR033C 444 nt5.75□□□□□ -1.49
TDA7P53882 YKL031WYKL031W 414 nt5.75□□□□□ -1.49
TDA7P53882 DPH5YLR172C 903 nt5.75□□□□□ -1.49
TDA7P53882 YDL114WYDL114W 927 nt5.74□□□□□ -1.49
TDA7P53882 COA1YIL157C 594 nt5.74□□□□□ -1.49
TDA7P53882 SYN8YAL014C 768 nt5.74□□□□□ -1.49
TDA7P53882 CAR1YPL111W 1002 nt5.74□□□□□ -1.49
TDA7P53882 KKQ8YKL168C 2175 nt5.73□□□□□ -1.49
TDA7P53882 YDL057WYDL057W 987 nt5.73□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms