Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 GEX1YCL073C 1848 nt5.39□□□□□ -1.55
LSM4P40070 GEX2YKR106W 1848 nt5.39□□□□□ -1.55
LSM4P40070 ERG1YGR175C 1491 nt5.39□□□□□ -1.55
LSM4P40070 KEX2YNL238W 2445 nt5.38□□□□□ -1.55
LSM4P40070 ROG3YFR022W 2202 nt5.38□□□□□ -1.55
LSM4P40070 CWC21YDR482C 408 nt5.38□□□□□ -1.55
LSM4P40070 tG(GCC)BtG(GCC)B 71 nt5.38□□□□□ -1.55
LSM4P40070 SUF16tG(GCC)C 71 nt5.38□□□□□ -1.55
LSM4P40070 tG(GCC)D1tG(GCC)D1 71 nt5.38□□□□□ -1.55
LSM4P40070 tG(GCC)D2tG(GCC)D2 71 nt5.38□□□□□ -1.55
LSM4P40070 tG(GCC)EtG(GCC)E 71 nt5.38□□□□□ -1.55
LSM4P40070 SUF20tG(GCC)F1 71 nt5.38□□□□□ -1.55
LSM4P40070 tG(GCC)F2tG(GCC)F2 71 nt5.38□□□□□ -1.55
LSM4P40070 tG(GCC)G1tG(GCC)G1 71 nt5.38□□□□□ -1.55
LSM4P40070 tG(GCC)G2tG(GCC)G2 71 nt5.38□□□□□ -1.55
LSM4P40070 tG(GCC)J1tG(GCC)J1 71 nt5.38□□□□□ -1.55
LSM4P40070 SUF23tG(GCC)J2 71 nt5.38□□□□□ -1.55
LSM4P40070 tG(GCC)MtG(GCC)M 71 nt5.38□□□□□ -1.55
LSM4P40070 tG(GCC)O1tG(GCC)O1 71 nt5.38□□□□□ -1.55
LSM4P40070 SUF17tG(GCC)O2 71 nt5.38□□□□□ -1.55
LSM4P40070 tG(GCC)P1tG(GCC)P1 71 nt5.38□□□□□ -1.55
LSM4P40070 tG(GCC)P2tG(GCC)P2 71 nt5.38□□□□□ -1.55
LSM4P40070 RPL7AYGL076C 735 nt5.38□□□□□ -1.55
LSM4P40070 RPP1YHR062C 882 nt5.38□□□□□ -1.55
LSM4P40070 SHP1YBL058W 1272 nt5.38□□□□□ -1.55
LSM4P40070 SEC62YPL094C 825 nt5.38□□□□□ -1.55
LSM4P40070 RPL7BYPL198W 735 nt5.38□□□□□ -1.55
LSM4P40070 SFB3YHR098C 2790 nt5.38□□□□□ -1.55
LSM4P40070 DBP9YLR276C 1785 nt5.37□□□□□ -1.55
LSM4P40070 PTC7YHR076W 1032 nt5.37□□□□□ -1.55
LSM4P40070 NPA3YJR072C 1158 nt5.37□□□□□ -1.55
LSM4P40070 YNL017CYNL017C 339 nt5.37□□□□□ -1.55
LSM4P40070 YPR123CYPR123C 435 nt5.37□□□□□ -1.55
LSM4P40070 HST3YOR025W 1344 nt5.37□□□□□ -1.55
LSM4P40070 NTE1YML059C 5040 nt5.37□□□□□ -1.55
LSM4P40070 DUG1YFR044C 1446 nt5.37□□□□□ -1.55
LSM4P40070 MTC2YKL098W 1074 nt5.36□□□□□ -1.55
LSM4P40070 VPS4YPR173C 1314 nt5.36□□□□□ -1.55
LSM4P40070 DOT1YDR440W 1749 nt5.36□□□□□ -1.55
LSM4P40070 CCT8YJL008C 1707 nt5.36□□□□□ -1.55
LSM4P40070 ALT1YLR089C 1779 nt5.36□□□□□ -1.55
LSM4P40070 IRS4YKR019C 1848 nt5.36□□□□□ -1.55
LSM4P40070 YHL017WYHL017W 1599 nt5.35□□□□□ -1.55
LSM4P40070 THI2YBR240C 1353 nt5.35□□□□□ -1.55
LSM4P40070 YSC83YHR017W 1158 nt5.35□□□□□ -1.55
LSM4P40070 CBR1YIL043C 855 nt5.35□□□□□ -1.55
LSM4P40070 TSR3YOR006C 942 nt5.35□□□□□ -1.55
LSM4P40070 CTF19YPL018W 1110 nt5.35□□□□□ -1.55
LSM4P40070 NHP6BYBR089C-A 300 nt5.35□□□□□ -1.55
LSM4P40070 CST6YIL036W 1764 nt5.34□□□□□ -1.55
LSM4P40070 YFL052WYFL052W 1398 nt5.34□□□□□ -1.55
LSM4P40070 SPS22YCL048W 1392 nt5.34□□□□□ -1.55
LSM4P40070 HEM2YGL040C 1029 nt5.34□□□□□ -1.55
LSM4P40070 YRB2YIL063C 984 nt5.34□□□□□ -1.55
LSM4P40070 MRS1YIR021W 1092 nt5.34□□□□□ -1.55
LSM4P40070 EFM3YJR129C 1020 nt5.34□□□□□ -1.55
LSM4P40070 YKL223WYKL223W 333 nt5.34□□□□□ -1.55
LSM4P40070 RPL10YLR075W 666 nt5.34□□□□□ -1.55
LSM4P40070 ECM19YLR390W 339 nt5.34□□□□□ -1.55
LSM4P40070 JIP4YDR475C 2631 nt5.34□□□□□ -1.55
LSM4P40070 GAA1YLR088W 1845 nt5.34□□□□□ -1.55
LSM4P40070 YHK8YHR048W 1545 nt5.33□□□□□ -1.56
LSM4P40070 SPT3YDR392W 1014 nt5.33□□□□□ -1.56
LSM4P40070 YLR123CYLR123C 330 nt5.33□□□□□ -1.56
LSM4P40070 MSO1YNR049C 633 nt5.33□□□□□ -1.56
LSM4P40070 RIX7YLL034C 2514 nt5.33□□□□□ -1.56
LSM4P40070 GDA1YEL042W 1557 nt5.33□□□□□ -1.56
LSM4P40070 CDC16YKL022C 2523 nt5.32□□□□□ -1.56
LSM4P40070 SQT1YIR012W 1296 nt5.32□□□□□ -1.56
LSM4P40070 ENV7YPL236C 1095 nt5.32□□□□□ -1.56
LSM4P40070 CMR1YDL156W 1569 nt5.32□□□□□ -1.56
LSM4P40070 RNR3YIL066C 2610 nt5.32□□□□□ -1.56
LSM4P40070 MSS1YMR023C 1581 nt5.32□□□□□ -1.56
LSM4P40070 OXP1YKL215C 3861 nt5.31□□□□□ -1.56
LSM4P40070 YMR034CYMR034C 1305 nt5.31□□□□□ -1.56
LSM4P40070 YHR213W-BYHR213W-B 300 nt5.31□□□□□ -1.56
LSM4P40070 YAR064WYAR064W 300 nt5.31□□□□□ -1.56
LSM4P40070 MSN2YMR037C 2115 nt5.31□□□□□ -1.56
LSM4P40070 TMA46YOR091W 1038 nt5.31□□□□□ -1.56
LSM4P40070 BUD32YGR262C 786 nt5.3□□□□□ -1.56
LSM4P40070 CDC11YJR076C 1248 nt5.3□□□□□ -1.56
LSM4P40070 SRL2YLR082C 1179 nt5.3□□□□□ -1.56
LSM4P40070 YLR312CYLR312C 1197 nt5.3□□□□□ -1.56
LSM4P40070 CCC2YDR270W 3015 nt5.3□□□□□ -1.56
LSM4P40070 EPS1YIL005W 2106 nt5.3□□□□□ -1.56
LSM4P40070 GSY2YLR258W 2118 nt5.3□□□□□ -1.56
LSM4P40070 EDE1YBL047C 4146 nt5.3□□□□□ -1.56
LSM4P40070 PGM1YKL127W 1713 nt5.29□□□□□ -1.56
LSM4P40070 PYC2YBR218C 3543 nt5.29□□□□□ -1.56
LSM4P40070 COX20YDR231C 618 nt5.29□□□□□ -1.56
LSM4P40070 ASK1YKL052C 879 nt5.29□□□□□ -1.56
LSM4P40070 MIA40YKL195W 1212 nt5.29□□□□□ -1.56
LSM4P40070 YML083CYML083C 1257 nt5.29□□□□□ -1.56
LSM4P40070 BSC4YNL269W 396 nt5.29□□□□□ -1.56
LSM4P40070 CHS5YLR330W 2016 nt5.29□□□□□ -1.56
LSM4P40070 RVB2YPL235W 1416 nt5.29□□□□□ -1.56
LSM4P40070 DOT5YIL010W 648 nt5.28□□□□□ -1.56
LSM4P40070 YNL285WYNL285W 372 nt5.28□□□□□ -1.56
LSM4P40070 SCO2YBR024W 906 nt5.28□□□□□ -1.56
LSM4P40070 CLB1YGR108W 1416 nt5.28□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 30.1 ms