Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MSR1P21757 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
MSR1P21757 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MSR1P21757 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.18■□□□□ 0.98
MSR1P21757 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.18■□□□□ 0.98
MSR1P21757 AC093536.1-201ENST00000569153 554 ntBASIC21.18■□□□□ 0.98
MSR1P21757 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.18■□□□□ 0.98
MSR1P21757 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSR1P21757 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MSR1P21757 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.18■□□□□ 0.98
MSR1P21757 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MSR1P21757 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSR1P21757 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
MSR1P21757 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.17■□□□□ 0.98
MSR1P21757 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSR1P21757 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MSR1P21757 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.17■□□□□ 0.98
MSR1P21757 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSR1P21757 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.16■□□□□ 0.98
MSR1P21757 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MSR1P21757 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
MSR1P21757 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.16■□□□□ 0.98
MSR1P21757 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSR1P21757 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSR1P21757 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
MSR1P21757 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.16■□□□□ 0.98
MSR1P21757 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MSR1P21757 AC020928.2-201ENST00000588717 2197 ntBASIC21.16■□□□□ 0.98
MSR1P21757 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
MSR1P21757 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
MSR1P21757 RNF126P1-201ENST00000567452 1320 ntBASIC21.15■□□□□ 0.98
MSR1P21757 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSR1P21757 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSR1P21757 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.15■□□□□ 0.98
MSR1P21757 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MSR1P21757 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSR1P21757 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MSR1P21757 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
MSR1P21757 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MSR1P21757 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
MSR1P21757 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MSR1P21757 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MSR1P21757 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MSR1P21757 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MSR1P21757 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSR1P21757 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSR1P21757 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSR1P21757 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSR1P21757 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
MSR1P21757 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.13■□□□□ 0.97
MSR1P21757 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MSR1P21757 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
MSR1P21757 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MSR1P21757 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MSR1P21757 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSR1P21757 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MSR1P21757 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
MSR1P21757 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MSR1P21757 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSR1P21757 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
MSR1P21757 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSR1P21757 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.11■□□□□ 0.97
MSR1P21757 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSR1P21757 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSR1P21757 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSR1P21757 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSR1P21757 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
MSR1P21757 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSR1P21757 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSR1P21757 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSR1P21757 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSR1P21757 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSR1P21757 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSR1P21757 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSR1P21757 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSR1P21757 RAP2CP1-202ENST00000605179 643 ntBASIC21.09■□□□□ 0.97
MSR1P21757 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSR1P21757 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSR1P21757 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.09■□□□□ 0.97
MSR1P21757 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.08■□□□□ 0.97
MSR1P21757 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MSR1P21757 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MSR1P21757 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MSR1P21757 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
MSR1P21757 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MSR1P21757 AC026202.3-201ENST00000600805 1127 ntBASIC21.07■□□□□ 0.96
MSR1P21757 AC097639.1-201ENST00000565519 1891 ntBASIC21.07■□□□□ 0.96
MSR1P21757 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.06■□□□□ 0.96
MSR1P21757 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSR1P21757 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSR1P21757 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSR1P21757 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSR1P21757 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
MSR1P21757 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSR1P21757 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MSR1P21757 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.05■□□□□ 0.96
MSR1P21757 HSD17B1P1-201ENST00000590052 955 ntBASIC21.05■□□□□ 0.96
MSR1P21757 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSR1P21757 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSR1P21757 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms