Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF728P0DKX0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF728P0DKX0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF728P0DKX0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.33■□□□□ 0.84
ZNF728P0DKX0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF728P0DKX0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF728P0DKX0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF728P0DKX0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.32■□□□□ 0.84
ZNF728P0DKX0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ZNF728P0DKX0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.32■□□□□ 0.84
ZNF728P0DKX0 AC060814.1-201ENST00000554326 538 ntBASIC20.32■□□□□ 0.84
ZNF728P0DKX0 AC022413.1-201ENST00000624602 984 ntBASIC20.32■□□□□ 0.84
ZNF728P0DKX0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
ZNF728P0DKX0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF728P0DKX0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF728P0DKX0 AC010501.1-201ENST00000606270 1962 ntBASIC20.31■□□□□ 0.84
ZNF728P0DKX0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNF728P0DKX0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF728P0DKX0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ZNF728P0DKX0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ZNF728P0DKX0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF728P0DKX0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF728P0DKX0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZNF728P0DKX0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF728P0DKX0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF728P0DKX0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF728P0DKX0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF728P0DKX0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF728P0DKX0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF728P0DKX0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ZNF728P0DKX0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF728P0DKX0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF728P0DKX0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
ZNF728P0DKX0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ZNF728P0DKX0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF728P0DKX0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF728P0DKX0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF728P0DKX0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
ZNF728P0DKX0 AC142381.3-201ENST00000568208 1670 ntBASIC20.27■□□□□ 0.84
ZNF728P0DKX0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF728P0DKX0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ZNF728P0DKX0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF728P0DKX0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF728P0DKX0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF728P0DKX0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF728P0DKX0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF728P0DKX0 GPX1-201ENST00000419349 1106 ntBASIC20.26■□□□□ 0.83
ZNF728P0DKX0 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.26■□□□□ 0.83
ZNF728P0DKX0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.26■□□□□ 0.83
ZNF728P0DKX0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.26■□□□□ 0.83
ZNF728P0DKX0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ZNF728P0DKX0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF728P0DKX0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF728P0DKX0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF728P0DKX0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF728P0DKX0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF728P0DKX0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF728P0DKX0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF728P0DKX0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF728P0DKX0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF728P0DKX0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNF728P0DKX0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF728P0DKX0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF728P0DKX0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF728P0DKX0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF728P0DKX0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
ZNF728P0DKX0 AL359504.2-201ENST00000605506 1601 ntBASIC20.24■□□□□ 0.83
ZNF728P0DKX0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF728P0DKX0 AC092296.2-201ENST00000589470 999 ntBASIC20.23■□□□□ 0.83
ZNF728P0DKX0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF728P0DKX0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.23■□□□□ 0.83
ZNF728P0DKX0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF728P0DKX0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF728P0DKX0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF728P0DKX0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF728P0DKX0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF728P0DKX0 AL157400.5-201ENST00000507624 621 ntBASIC20.22■□□□□ 0.83
ZNF728P0DKX0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF728P0DKX0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF728P0DKX0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF728P0DKX0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF728P0DKX0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF728P0DKX0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF728P0DKX0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.21■□□□□ 0.83
ZNF728P0DKX0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF728P0DKX0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF728P0DKX0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF728P0DKX0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF728P0DKX0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF728P0DKX0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF728P0DKX0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZNF728P0DKX0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF728P0DKX0 ECEL1P2-201ENST00000461596 1295 ntBASIC20.2■□□□□ 0.82
ZNF728P0DKX0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF728P0DKX0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF728P0DKX0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF728P0DKX0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF728P0DKX0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF728P0DKX0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF728P0DKX0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms