Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.51■■□□□ 1.99
HMGCRP04035 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.51■■□□□ 1.99
HMGCRP04035 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■□□□ 1.99
HMGCRP04035 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.51■■□□□ 1.99
HMGCRP04035 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.51■■□□□ 1.99
HMGCRP04035 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.51■■□□□ 1.99
HMGCRP04035 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.51■■□□□ 1.99
HMGCRP04035 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.51■■□□□ 1.99
HMGCRP04035 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.5■■□□□ 1.99
HMGCRP04035 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.5■■□□□ 1.99
HMGCRP04035 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.5■■□□□ 1.99
HMGCRP04035 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
HMGCRP04035 AC131281.2-201ENST00000520478 145 ntBASIC27.49■■□□□ 1.99
HMGCRP04035 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
HMGCRP04035 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.49■■□□□ 1.99
HMGCRP04035 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.49■■□□□ 1.99
HMGCRP04035 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
HMGCRP04035 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
HMGCRP04035 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
HMGCRP04035 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.48■■□□□ 1.99
HMGCRP04035 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
HMGCRP04035 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
HMGCRP04035 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
HMGCRP04035 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.47■■□□□ 1.99
HMGCRP04035 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.47■■□□□ 1.99
HMGCRP04035 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
HMGCRP04035 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
HMGCRP04035 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
HMGCRP04035 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.46■■□□□ 1.99
HMGCRP04035 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
HMGCRP04035 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
HMGCRP04035 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.45■■□□□ 1.98
HMGCRP04035 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.45■■□□□ 1.98
HMGCRP04035 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
HMGCRP04035 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.45■■□□□ 1.98
HMGCRP04035 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
HMGCRP04035 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
HMGCRP04035 AC139426.1-201ENST00000568218 2529 ntBASIC27.45■■□□□ 1.98
HMGCRP04035 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
HMGCRP04035 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.44■■□□□ 1.98
HMGCRP04035 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.44■■□□□ 1.98
HMGCRP04035 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.44■■□□□ 1.98
HMGCRP04035 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
HMGCRP04035 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.43■■□□□ 1.98
HMGCRP04035 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.43■■□□□ 1.98
HMGCRP04035 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.43■■□□□ 1.98
HMGCRP04035 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
HMGCRP04035 AC120024.1-201ENST00000562672 995 ntBASIC27.43■■□□□ 1.98
HMGCRP04035 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.43■■□□□ 1.98
HMGCRP04035 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.42■■□□□ 1.98
HMGCRP04035 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
HMGCRP04035 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
HMGCRP04035 AC092028.1-203ENST00000608262 953 ntBASIC27.42■■□□□ 1.98
HMGCRP04035 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
HMGCRP04035 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
HMGCRP04035 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
HMGCRP04035 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
HMGCRP04035 AL136116.3-201ENST00000402907 1138 ntBASIC27.41■■□□□ 1.98
HMGCRP04035 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
HMGCRP04035 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
HMGCRP04035 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
HMGCRP04035 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
HMGCRP04035 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC27.4■■□□□ 1.98
HMGCRP04035 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
HMGCRP04035 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HMGCRP04035 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HMGCRP04035 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HMGCRP04035 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HMGCRP04035 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
HMGCRP04035 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.39■■□□□ 1.98
HMGCRP04035 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.39■■□□□ 1.98
HMGCRP04035 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
HMGCRP04035 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HMGCRP04035 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
HMGCRP04035 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
HMGCRP04035 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.38■■□□□ 1.97
HMGCRP04035 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
HMGCRP04035 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
HMGCRP04035 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
HMGCRP04035 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.36■■□□□ 1.97
HMGCRP04035 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
HMGCRP04035 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
HMGCRP04035 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
HMGCRP04035 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HMGCRP04035 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.36■■□□□ 1.97
HMGCRP04035 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
HMGCRP04035 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.36■■□□□ 1.97
HMGCRP04035 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
HMGCRP04035 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.36■■□□□ 1.97
HMGCRP04035 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HMGCRP04035 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.36■■□□□ 1.97
HMGCRP04035 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
HMGCRP04035 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.35■■□□□ 1.97
HMGCRP04035 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.35■■□□□ 1.97
HMGCRP04035 AC110285.6-201ENST00000617652 491 ntBASIC27.35■■□□□ 1.97
HMGCRP04035 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
HMGCRP04035 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
HMGCRP04035 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
HMGCRP04035 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
HMGCRP04035 AL117332.1-201ENST00000622628 974 ntBASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms