Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IDH3BO43837 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.84■■□□□ 1.09
IDH3BO43837 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IDH3BO43837 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
IDH3BO43837 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
IDH3BO43837 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
IDH3BO43837 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IDH3BO43837 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
IDH3BO43837 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IDH3BO43837 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IDH3BO43837 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
IDH3BO43837 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.83■■□□□ 1.09
IDH3BO43837 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.83■■□□□ 1.09
IDH3BO43837 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
IDH3BO43837 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
IDH3BO43837 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
IDH3BO43837 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IDH3BO43837 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IDH3BO43837 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
IDH3BO43837 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
IDH3BO43837 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IDH3BO43837 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
IDH3BO43837 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.82■■□□□ 1.08
IDH3BO43837 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IDH3BO43837 AL359258.2-201ENST00000564063 1566 ntBASIC21.82■■□□□ 1.08
IDH3BO43837 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IDH3BO43837 ERN1-208ENST00000606895 2068 ntBASIC21.81■■□□□ 1.08
IDH3BO43837 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
IDH3BO43837 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IDH3BO43837 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IDH3BO43837 HLA-V-202ENST00000446817 847 ntBASIC21.81■■□□□ 1.08
IDH3BO43837 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IDH3BO43837 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
IDH3BO43837 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
IDH3BO43837 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.8■■□□□ 1.08
IDH3BO43837 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
IDH3BO43837 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.8■■□□□ 1.08
IDH3BO43837 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IDH3BO43837 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IDH3BO43837 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.8■■□□□ 1.08
IDH3BO43837 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
IDH3BO43837 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.8■■□□□ 1.08
IDH3BO43837 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.8■■□□□ 1.08
IDH3BO43837 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IDH3BO43837 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IDH3BO43837 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
IDH3BO43837 LINC00543-201ENST00000567234 1845 ntBASIC21.78■■□□□ 1.08
IDH3BO43837 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IDH3BO43837 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IDH3BO43837 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
IDH3BO43837 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IDH3BO43837 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
IDH3BO43837 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.77■■□□□ 1.08
IDH3BO43837 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
IDH3BO43837 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IDH3BO43837 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.77■■□□□ 1.08
IDH3BO43837 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.77■■□□□ 1.08
IDH3BO43837 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
IDH3BO43837 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.77■■□□□ 1.08
IDH3BO43837 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IDH3BO43837 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
IDH3BO43837 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IDH3BO43837 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
IDH3BO43837 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
IDH3BO43837 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
IDH3BO43837 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
IDH3BO43837 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
IDH3BO43837 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
IDH3BO43837 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.76■■□□□ 1.07
IDH3BO43837 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.76■■□□□ 1.07
IDH3BO43837 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IDH3BO43837 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
IDH3BO43837 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IDH3BO43837 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
IDH3BO43837 AL359504.2-201ENST00000605506 1601 ntBASIC21.75■■□□□ 1.07
IDH3BO43837 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IDH3BO43837 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.74■■□□□ 1.07
IDH3BO43837 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
IDH3BO43837 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IDH3BO43837 AC126177.7-201ENST00000547904 679 ntBASIC21.74■■□□□ 1.07
IDH3BO43837 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IDH3BO43837 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IDH3BO43837 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.74■■□□□ 1.07
IDH3BO43837 AC012676.1-201ENST00000574705 1949 ntBASIC21.74■■□□□ 1.07
IDH3BO43837 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IDH3BO43837 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
IDH3BO43837 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
IDH3BO43837 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.73■■□□□ 1.07
IDH3BO43837 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IDH3BO43837 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
IDH3BO43837 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
IDH3BO43837 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
IDH3BO43837 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
IDH3BO43837 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
IDH3BO43837 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.71■■□□□ 1.07
IDH3BO43837 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.71■■□□□ 1.07
IDH3BO43837 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
IDH3BO43837 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
IDH3BO43837 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.71■■□□□ 1.07
IDH3BO43837 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms