Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHOXO15266 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHOXO15266 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHOXO15266 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SHOXO15266 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHOXO15266 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHOXO15266 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.29■□□□□ 0.84
SHOXO15266 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHOXO15266 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHOXO15266 SLC25A24-204ENST00000569674 2357 ntBASIC20.29■□□□□ 0.84
SHOXO15266 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SHOXO15266 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHOXO15266 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHOXO15266 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
SHOXO15266 AL121603.2-201ENST00000557373 2117 ntBASIC20.27■□□□□ 0.84
SHOXO15266 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHOXO15266 RPS2P35-201ENST00000443417 897 ntBASIC20.27■□□□□ 0.84
SHOXO15266 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.27■□□□□ 0.84
SHOXO15266 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHOXO15266 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHOXO15266 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.27■□□□□ 0.84
SHOXO15266 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.27■□□□□ 0.84
SHOXO15266 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SHOXO15266 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SHOXO15266 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SHOXO15266 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SHOXO15266 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHOXO15266 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHOXO15266 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.26■□□□□ 0.83
SHOXO15266 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHOXO15266 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SHOXO15266 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.26■□□□□ 0.83
SHOXO15266 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.26■□□□□ 0.83
SHOXO15266 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHOXO15266 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SHOXO15266 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHOXO15266 AC110285.7-201ENST00000624417 1536 ntBASIC20.26■□□□□ 0.83
SHOXO15266 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHOXO15266 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SHOXO15266 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHOXO15266 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.25■□□□□ 0.83
SHOXO15266 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHOXO15266 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHOXO15266 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHOXO15266 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHOXO15266 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SHOXO15266 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.24■□□□□ 0.83
SHOXO15266 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SHOXO15266 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHOXO15266 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.24■□□□□ 0.83
SHOXO15266 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHOXO15266 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHOXO15266 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHOXO15266 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHOXO15266 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHOXO15266 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHOXO15266 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHOXO15266 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHOXO15266 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHOXO15266 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
SHOXO15266 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SHOXO15266 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.23■□□□□ 0.83
SHOXO15266 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHOXO15266 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.22■□□□□ 0.83
SHOXO15266 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SHOXO15266 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SHOXO15266 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHOXO15266 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SHOXO15266 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHOXO15266 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SHOXO15266 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SHOXO15266 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SHOXO15266 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHOXO15266 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHOXO15266 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SHOXO15266 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHOXO15266 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHOXO15266 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.2■□□□□ 0.82
SHOXO15266 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHOXO15266 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHOXO15266 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SHOXO15266 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHOXO15266 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.19■□□□□ 0.82
SHOXO15266 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.19■□□□□ 0.82
SHOXO15266 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.19■□□□□ 0.82
SHOXO15266 AL139125.2-201ENST00000623134 1869 ntBASIC20.19■□□□□ 0.82
SHOXO15266 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHOXO15266 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHOXO15266 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHOXO15266 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.19■□□□□ 0.82
SHOXO15266 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.18■□□□□ 0.82
SHOXO15266 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.18■□□□□ 0.82
SHOXO15266 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SHOXO15266 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHOXO15266 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHOXO15266 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHOXO15266 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.17■□□□□ 0.82
SHOXO15266 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHOXO15266 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHOXO15266 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms