Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHL1O00533 AC074183.2-201ENST00000623112 922 ntBASIC31.26■■■□□ 2.59
CHL1O00533 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.26■■■□□ 2.59
CHL1O00533 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHL1O00533 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHL1O00533 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.25■■■□□ 2.59
CHL1O00533 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.25■■■□□ 2.59
CHL1O00533 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHL1O00533 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHL1O00533 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHL1O00533 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.25■■■□□ 2.59
CHL1O00533 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHL1O00533 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHL1O00533 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHL1O00533 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHL1O00533 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.24■■■□□ 2.59
CHL1O00533 AC010980.1-201ENST00000587192 1142 ntBASIC31.24■■■□□ 2.59
CHL1O00533 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CHL1O00533 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CHL1O00533 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHL1O00533 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHL1O00533 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CHL1O00533 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC31.22■■■□□ 2.59
CHL1O00533 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CHL1O00533 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CHL1O00533 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHL1O00533 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHL1O00533 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.21■■■□□ 2.59
CHL1O00533 AC139795.1-202ENST00000500444 432 ntBASIC31.21■■■□□ 2.59
CHL1O00533 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CHL1O00533 BHLHE23-202ENST00000612929 1109 ntBASIC31.21■■■□□ 2.59
CHL1O00533 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.21■■■□□ 2.59
CHL1O00533 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CHL1O00533 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.2■■■□□ 2.59
CHL1O00533 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.58
CHL1O00533 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.19■■■□□ 2.58
CHL1O00533 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CHL1O00533 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.19■■■□□ 2.58
CHL1O00533 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHL1O00533 KRT18P10-201ENST00000388836 1287 ntBASIC31.19■■■□□ 2.58
CHL1O00533 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHL1O00533 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHL1O00533 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHL1O00533 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
CHL1O00533 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHL1O00533 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHL1O00533 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHL1O00533 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
CHL1O00533 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CHL1O00533 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CHL1O00533 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.17■■■□□ 2.58
CHL1O00533 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHL1O00533 LONRF2P2-201ENST00000439212 571 ntBASIC31.17■■■□□ 2.58
CHL1O00533 RARRES2P1-201ENST00000474487 481 ntBASIC31.17■■■□□ 2.58
CHL1O00533 AC019171.1-201ENST00000601251 1056 ntBASIC31.17■■■□□ 2.58
CHL1O00533 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHL1O00533 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHL1O00533 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.17■■■□□ 2.58
CHL1O00533 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
CHL1O00533 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHL1O00533 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHL1O00533 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.16■■■□□ 2.58
CHL1O00533 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHL1O00533 AC103834.1-201ENST00000520383 144 ntBASIC31.16■■■□□ 2.58
CHL1O00533 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.16■■■□□ 2.58
CHL1O00533 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHL1O00533 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.15■■■□□ 2.58
CHL1O00533 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.15■■■□□ 2.58
CHL1O00533 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CHL1O00533 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
CHL1O00533 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHL1O00533 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.15■■■□□ 2.58
CHL1O00533 ERN1-208ENST00000606895 2068 ntBASIC31.15■■■□□ 2.58
CHL1O00533 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHL1O00533 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.14■■■□□ 2.58
CHL1O00533 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.14■■■□□ 2.58
CHL1O00533 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHL1O00533 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.14■■■□□ 2.58
CHL1O00533 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.14■■■□□ 2.58
CHL1O00533 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.13■■■□□ 2.57
CHL1O00533 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.13■■■□□ 2.57
CHL1O00533 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.13■■■□□ 2.57
CHL1O00533 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHL1O00533 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
CHL1O00533 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHL1O00533 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
CHL1O00533 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHL1O00533 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHL1O00533 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CHL1O00533 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.11■■■□□ 2.57
CHL1O00533 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CHL1O00533 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CHL1O00533 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHL1O00533 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
CHL1O00533 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.09■■■□□ 2.57
CHL1O00533 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHL1O00533 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHL1O00533 AC096887.2-201ENST00000623443 1957 ntBASIC31.08■■■□□ 2.57
CHL1O00533 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHL1O00533 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms