Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC092296.2-201ENST00000589470 999 ntBASIC19.36■□□□□ 0.69
SRRM4A7MD48 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.36■□□□□ 0.69
SRRM4A7MD48 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.36■□□□□ 0.69
SRRM4A7MD48 SMPD5-203ENST00000639008 1464 ntBASIC19.35■□□□□ 0.69
SRRM4A7MD48 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRRM4A7MD48 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRRM4A7MD48 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRRM4A7MD48 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SRRM4A7MD48 AC022413.1-201ENST00000624602 984 ntBASIC19.35■□□□□ 0.69
SRRM4A7MD48 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SRRM4A7MD48 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRRM4A7MD48 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRRM4A7MD48 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRRM4A7MD48 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
SRRM4A7MD48 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SRRM4A7MD48 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SRRM4A7MD48 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SRRM4A7MD48 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.33■□□□□ 0.69
SRRM4A7MD48 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.33■□□□□ 0.68
SRRM4A7MD48 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRRM4A7MD48 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SRRM4A7MD48 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
SRRM4A7MD48 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SRRM4A7MD48 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SRRM4A7MD48 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRRM4A7MD48 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.32■□□□□ 0.68
SRRM4A7MD48 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.32■□□□□ 0.68
SRRM4A7MD48 MIR4449-201ENST00000578365 66 ntBASIC19.32■□□□□ 0.68
SRRM4A7MD48 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRRM4A7MD48 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SRRM4A7MD48 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRRM4A7MD48 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRRM4A7MD48 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRRM4A7MD48 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRRM4A7MD48 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.32■□□□□ 0.68
SRRM4A7MD48 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRRM4A7MD48 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.31■□□□□ 0.68
SRRM4A7MD48 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.31■□□□□ 0.68
SRRM4A7MD48 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRRM4A7MD48 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRRM4A7MD48 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRRM4A7MD48 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRRM4A7MD48 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.31■□□□□ 0.68
SRRM4A7MD48 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM4A7MD48 ECEL1P2-201ENST00000461596 1295 ntBASIC19.3■□□□□ 0.68
SRRM4A7MD48 MIR3960-201ENST00000583311 91 ntBASIC19.3■□□□□ 0.68
SRRM4A7MD48 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM4A7MD48 AC022211.4-201ENST00000625094 2161 ntBASIC19.3■□□□□ 0.68
SRRM4A7MD48 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRRM4A7MD48 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.29■□□□□ 0.68
SRRM4A7MD48 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SRRM4A7MD48 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.29■□□□□ 0.68
SRRM4A7MD48 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRRM4A7MD48 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SRRM4A7MD48 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM4A7MD48 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM4A7MD48 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SRRM4A7MD48 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM4A7MD48 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM4A7MD48 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM4A7MD48 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SRRM4A7MD48 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.28■□□□□ 0.68
SRRM4A7MD48 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM4A7MD48 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRRM4A7MD48 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM4A7MD48 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM4A7MD48 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SRRM4A7MD48 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SRRM4A7MD48 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.27■□□□□ 0.68
SRRM4A7MD48 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.27■□□□□ 0.68
SRRM4A7MD48 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.27■□□□□ 0.67
SRRM4A7MD48 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
SRRM4A7MD48 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SRRM4A7MD48 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM4A7MD48 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM4A7MD48 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM4A7MD48 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM4A7MD48 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM4A7MD48 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM4A7MD48 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM4A7MD48 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM4A7MD48 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SRRM4A7MD48 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM4A7MD48 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SRRM4A7MD48 AC142381.3-201ENST00000568208 1670 ntBASIC19.26■□□□□ 0.67
SRRM4A7MD48 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM4A7MD48 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SRRM4A7MD48 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.25■□□□□ 0.67
SRRM4A7MD48 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM4A7MD48 AC097639.1-201ENST00000565519 1891 ntBASIC19.25■□□□□ 0.67
SRRM4A7MD48 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM4A7MD48 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.25■□□□□ 0.67
SRRM4A7MD48 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM4A7MD48 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM4A7MD48 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM4A7MD48 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SRRM4A7MD48 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SRRM4A7MD48 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.24■□□□□ 0.67
SRRM4A7MD48 AC138932.3-201ENST00000567634 1902 ntBASIC19.24■□□□□ 0.67
SRRM4A7MD48 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms