Protein–RNA interactions for Protein: Q9Y679

AUP1, Ancient ubiquitous protein 1, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1Q9Y679 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AUP1Q9Y679 AL662844.1-201ENST00000546340 181 ntBASIC14.79□□□□□ -0.04
AUP1Q9Y679 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.79□□□□□ -0.04
AUP1Q9Y679 KRT18P55-202ENST00000578578 1546 ntBASIC14.79□□□□□ -0.04
AUP1Q9Y679 MIR5100-201ENST00000579544 119 ntBASIC14.79□□□□□ -0.04
AUP1Q9Y679 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.79□□□□□ -0.04
AUP1Q9Y679 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AUP1Q9Y679 BNIP3P18-201ENST00000593976 575 ntBASIC14.79□□□□□ -0.04
AUP1Q9Y679 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
AUP1Q9Y679 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.79□□□□□ -0.04
AUP1Q9Y679 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.79□□□□□ -0.04
AUP1Q9Y679 REXO1L6P-202ENST00000619970 1078 ntBASIC14.79□□□□□ -0.04
AUP1Q9Y679 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.79□□□□□ -0.04
AUP1Q9Y679 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AUP1Q9Y679 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AUP1Q9Y679 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
AUP1Q9Y679 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AUP1Q9Y679 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AUP1Q9Y679 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AUP1Q9Y679 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
AUP1Q9Y679 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 AC133963.1-201ENST00000504166 1679 ntBASIC14.78□□□□□ -0.04
AUP1Q9Y679 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 GMCL1P1-201ENST00000463439 1581 ntBASIC14.78□□□□□ -0.04
AUP1Q9Y679 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.78□□□□□ -0.04
AUP1Q9Y679 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 AC114341.1-201ENST00000618070 349 ntBASIC14.78□□□□□ -0.04
AUP1Q9Y679 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AUP1Q9Y679 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
AUP1Q9Y679 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
AUP1Q9Y679 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
AUP1Q9Y679 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
AUP1Q9Y679 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AUP1Q9Y679 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AUP1Q9Y679 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.77□□□□□ -0.04
AUP1Q9Y679 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.77□□□□□ -0.04
AUP1Q9Y679 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AUP1Q9Y679 DBET-201ENST00000630918 3363 ntBASIC14.77□□□□□ -0.04
AUP1Q9Y679 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AUP1Q9Y679 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
AUP1Q9Y679 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AUP1Q9Y679 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AUP1Q9Y679 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.77□□□□□ -0.05
AUP1Q9Y679 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AUP1Q9Y679 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AUP1Q9Y679 KRT18P65-201ENST00000439811 1286 ntBASIC14.77□□□□□ -0.05
AUP1Q9Y679 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.77□□□□□ -0.05
AUP1Q9Y679 AP002469.2-201ENST00000531724 424 ntBASIC14.77□□□□□ -0.05
AUP1Q9Y679 AC009533.2-201ENST00000543664 586 ntBASIC14.77□□□□□ -0.05
AUP1Q9Y679 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
AUP1Q9Y679 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.77□□□□□ -0.05
AUP1Q9Y679 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.77□□□□□ -0.05
AUP1Q9Y679 AC064862.7-201ENST00000604520 867 ntBASIC14.77□□□□□ -0.05
AUP1Q9Y679 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.77□□□□□ -0.05
AUP1Q9Y679 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
AUP1Q9Y679 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AUP1Q9Y679 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
AUP1Q9Y679 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
AUP1Q9Y679 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
AUP1Q9Y679 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
AUP1Q9Y679 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
AUP1Q9Y679 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
AUP1Q9Y679 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms