Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGA6Q9Y5G7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 AC211486.1-202ENST00000416371 468 ntBASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 RPS8P6-201ENST00000426177 609 ntBASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 HCG4B-203ENST00000450128 991 ntBASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 AC211476.1-201ENST00000503899 468 ntBASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 IGHV3-52-201ENST00000519770 353 ntBASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 AC005829.1-201ENST00000570002 483 ntBASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 AC109462.3-201ENST00000573934 613 ntBASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 GPR89P-201ENST00000407924 1495 ntBASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 AGGF1P2-201ENST00000426656 2106 ntBASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGA6Q9Y5G7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 DNAJB3-202ENST00000449667 1266 ntBASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 STK19B-204ENST00000512515 211 ntBASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 MIR4751-201ENST00000578027 74 ntBASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 AC009949.1-201ENST00000623048 1830 ntBASIC16.38■□□□□ 0.21
PCDHGA6Q9Y5G7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 AC002558.1-201ENST00000488906 803 ntBASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGA6Q9Y5G7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms