Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 TOP3BP1-201ENST00000420768 1380 ntBASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 KRT8P49-201ENST00000604166 1432 ntBASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
PCDHGC4Q9Y5F7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 PMS2P1-201ENST00000431037 1228 ntBASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 RNA5SP416-201ENST00000516838 111 ntBASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 ACTL9-202ENST00000612068 1252 ntBASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 AC010507.1-201ENST00000633895 436 ntBASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 AC105020.1-201ENST00000435356 2205 ntBASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGC4Q9Y5F7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 TUBB8P12-201ENST00000308911 1335 ntBASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 TUBB7P-202ENST00000428444 1305 ntBASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 TUBB8P7-204ENST00000567960 1332 ntBASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 AL121761.2-201ENST00000598007 1648 ntBASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 PCDHA12-202ENST00000613593 2588 ntBASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGC4Q9Y5F7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms