Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00588Q9Y4M8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC00588Q9Y4M8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00588Q9Y4M8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00588Q9Y4M8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00588Q9Y4M8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00588Q9Y4M8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00588Q9Y4M8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 RHBDF1P1-201ENST00000427504 1941 ntBASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 DUX4L17-201ENST00000557360 1267 ntBASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 AC091167.2-201ENST00000579581 588 ntBASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 AC141586.5-201ENST00000624546 2050 ntBASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 KRT8P49-201ENST00000604166 1432 ntBASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00588Q9Y4M8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
LINC00588Q9Y4M8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.55
LINC00588Q9Y4M8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LINC00588Q9Y4M8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 OR6D1P-203ENST00000641209 4860 ntBASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 PMS2P2-201ENST00000425039 1128 ntBASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 AP000344.2-201ENST00000512987 629 ntBASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 AP001350.2-201ENST00000625104 1094 ntBASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00588Q9Y4M8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms