Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9Y3F1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9Y3F1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9Y3F1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.57■□□□□ 0.56
Q9Y3F1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.57■□□□□ 0.56
Q9Y3F1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.57■□□□□ 0.56
Q9Y3F1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Q9Y3F1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.57■□□□□ 0.56
Q9Y3F1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Q9Y3F1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.57■□□□□ 0.56
Q9Y3F1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Q9Y3F1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q9Y3F1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.56■□□□□ 0.56
Q9Y3F1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Q9Y3F1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.56■□□□□ 0.56
Q9Y3F1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.56■□□□□ 0.56
Q9Y3F1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.56■□□□□ 0.56
Q9Y3F1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.56■□□□□ 0.56
Q9Y3F1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.56■□□□□ 0.56
Q9Y3F1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.56■□□□□ 0.56
Q9Y3F1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.56■□□□□ 0.56
Q9Y3F1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Q9Y3F1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.56■□□□□ 0.56
Q9Y3F1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.56■□□□□ 0.56
Q9Y3F1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.56■□□□□ 0.56
Q9Y3F1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.56■□□□□ 0.56
Q9Y3F1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q9Y3F1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Q9Y3F1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Q9Y3F1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.55■□□□□ 0.56
Q9Y3F1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.55■□□□□ 0.56
Q9Y3F1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Q9Y3F1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.55■□□□□ 0.56
Q9Y3F1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Q9Y3F1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.55■□□□□ 0.56
Q9Y3F1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 NME2P1-201ENST00000426182 414 ntBASIC18.55■□□□□ 0.56
Q9Y3F1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Q9Y3F1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Q9Y3F1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 AL596325.1-201ENST00000563991 1082 ntBASIC18.55■□□□□ 0.56
Q9Y3F1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.55■□□□□ 0.56
Q9Y3F1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.55■□□□□ 0.56
Q9Y3F1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.55■□□□□ 0.56
Q9Y3F1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.55■□□□□ 0.56
Q9Y3F1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.55■□□□□ 0.56
Q9Y3F1 RN7SL828P-201ENST00000607615 303 ntBASIC18.55■□□□□ 0.56
Q9Y3F1 AC004233.3-201ENST00000607794 1269 ntBASIC18.55■□□□□ 0.56
Q9Y3F1 TEX28P1-201ENST00000613479 1221 ntBASIC18.55■□□□□ 0.56
Q9Y3F1 TEX28P2-201ENST00000617764 1221 ntBASIC18.55■□□□□ 0.56
Q9Y3F1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.55■□□□□ 0.56
Q9Y3F1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 CETN4P-206ENST00000642099 2168 ntBASIC18.55■□□□□ 0.56
Q9Y3F1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.55■□□□□ 0.56
Q9Y3F1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Q9Y3F1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q9Y3F1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
Q9Y3F1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.54■□□□□ 0.56
Q9Y3F1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9Y3F1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Q9Y3F1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Q9Y3F1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9Y3F1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.54■□□□□ 0.56
Q9Y3F1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Q9Y3F1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9Y3F1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9Y3F1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q9Y3F1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms